LOC110521820 (LOC106584018)


Basic Information

Item Value
gene id LOC110521820
gene name LOC106584018
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 39877845 ~ 39906318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968777.1
cCCAGAGTATCCCCATTTCACGAACAACAGATTCAGAACACTCAGATTGGAGAGGAGAATGTGAAACGGCCTGGAACAGAAACAGGGACAGAGTTATCGTCAAAAACAATTACTGGAATTTATGGAAATGCGCAAAGACGCGCGCGGTTCTTTGGCACACTGGGGACCATCGATGGAATGTAGAAGTGTCTACTTTTAAGTCAATCATTGGACACAACTGATTTCGGAATTGTCGCTGTGAGGATTACAATTATGATATACGTCTTATTTTTGTTGTGCCTCGTCCATGTGTCAGGTGCGGTGACAGACCTGACCGTCATCTCCAACGCTGAGGCCTCCACCCCTCAGCTCTTCTCCATCTCCTGCCTCACTGGGGAGCGGGATGCAGCAGAGCTAGACCTGGACATCAAGAAGGACAACAGcatcctcatcctctcctcacgGCCACGTTACAGAGTCAAAAGGCCCAAGACCAAGGAGGTGGTGGCGAACGAGTTCGTGGGTGTGATGGACCTAACAGGCATCTTCTACTGCCATGCGTCCCAGGGAACTGATCCTCTTATAAACCTGGGTAAAGTGACTCTCATCAACAACTTTGCCAAAGCCCTATTTGTCCCGGCCCACCTCACGGTGACAGCAAACAGAGGAGACACAGTTCACCTGGCCATGCAGGTCCTGAGCTCCCAGAGACGAGACGTCACCTGGAAATACAACGGTAACTATCACTACACGACCCACTGGGGTGATGTGTCCAACAGTACGGCTGTACTAACCCTGGAGGATGTGGCTAAAGCCAACGAGGGCATCTACAGTGCCAGCTTCGTGGGAGACAGTCCCATCAATGGAGCCTGGATGAGGCTGATTGTCAGAGACTGTGGCAGTAAGAAGTGGGGTGCCGACTGTGACAAGGACTGTCCAGAGTGTCTCAACGGAGGGGTGTGTCACCACCGGGACGGGGACTGCATCTGCCCACCGGGGTTCATGGGGATGCGCTGCGAGacagCCTGTAGAGAGGGAATGTTTGGGCTTAACTGCCAGGAGTCATGCAAGCCAGAGATGGACTGTAGAGGGCTGAGGTTCTGCCTGGCTGACCCTTACGGATGCTCCTGTGCCAGTGGCTGGTCTGGAAACCACTGCAACAGATtCTGCCACAAGGACATGTACGGGGCAGACTGCAGGCTGCGCTGTAAGTGTAAGAACGGTGGAGTGTGTAACCACTTCAGTGGATGCCAGTGTCCCACTGGCTGGAGAGGACGGCACTGTGAGAAATCAGACCGCGCCCCCCAGATCTTGGACATGGCCAGTGGTCTAGAGTGGAACCTTCACTCCAGCCCCAAGATCCTGTGTTCCGCCACAGGCAACCCCCTGCCCAGTCACGGCAGCATTGAGCTGCGCAAACTGGACAGCACTGTGCTCAAGGCGTCTCGTACTACCATGGACTCCAATAAGAGCACAGCCCAGTTTGATATTCCCCGTCTGTCCACTGAGCATGCTGGGTTATGGGAGTGTAGGGTTTCCACCAATGGGGGACAAGACTCAAGGAAGTTCAACCTCAGTGTCAAAGAGCCACCATGCCCCAGCACCCCTCCCAAGCTGCTGGAGAAGAGGAGTAAGCAGCTGGTGGTGATGCCTGTGGAGTCCTACAGAGGAGACGGACCCATCGACTCCACCAAGCTCCTCTACAAGCCCATGGAGACAGGAGACTCCTGGTCCTCCATCATAGTGTACAGTAGAGAGCCTATAACTCTGATGAATCTGAAGCCATCTACACGCTACCACGTCCGTGTCCAGCTGACCCgtcctggggagggaggggaggggactcTGGGGCCTGAGGCCATCATGGAGACTGACTGTCCAGAGCCCACTCTTCGACCAGAGATTGACTTCAGCTCGCTGGAGGGCCGCAACGCCACTGTGCGCTGGCTGTTGCATGGCAACGCGGACAGGGCCAGCGGGTTCTTAGTGCAGCTCTTCGGGCCCTCCCCCTCAGGAGAGAAGCTGAGAGAGGAGACCACCCTGCTCAATGTGCTCTCCACCAAGTTCTACAACCTGCAGTACCACCAAGACTACACAGTGGTCGTCAGGCTGCTCAACTGTGGCAGTCTGGGGCCCGCCTCTAAGCCGTACAATATCCGCATAAACAGCCAGGgtCCCTCATCCCCTCGGAACGTCCAGGCTCTGCCCCTGTCTGTGTCTGCGGTGCAGGTGAAGTGGCAGCCCCCTGAGGACTCTAACGGGGGCATAGTAAAGTACATCATAGAGTACCAGTCGGTGGGACAGGGCAGCCTGCACCCCTGGGTCGACACAGACGATGGCAACAAGACAGCTAAAGATGTGACAGCGCTCAACGGGAGTACTCTCTACCAGTTCAGAGTGAGGGCCTTCTCTAAAGTACCCGGGGAGTGGAGCAAGTTTGTCCATGCCAGGACCcagggagatgGTCCCCAGGACTTCACTCCTACCACCCAGGGTGTGGGGGGGCTTCCAGGCAGTGAGGGCTACCATTTGTTGGTAGCTGTGGTGGGGTCTGTGACGGTCACCTGTGTCACCATCCTGCTGGCCCTGCTGGCTCTCTTCTGCATCCGCAAAACTCTGCTCAACCGCAGACGCACCTTCACTTACCAGTCTGGAtcgGGAGAGGAGACCATCCTTCAGTTTAACTCTGGGACCCTGACCCTGACAAGGAGGCCGAAGCCTACCTCTGAGCCCCTCACCTACCCCATCCTGGAGTGGGATGACATCAAGTTTGAAGATGTGATCGGAGAGGGCAACTTCGGACAGGTCATCAAGGCCATGATCAAGAAGGACGGGGCCAAGATGAGCGCTGCTATCAAGATGCTAAAAGCAGAGTTTGCCTCGGAGAATGACCACCGGGACTTTGCAGGAGAGCTGGAAGTGTTGTGTAAACTGGGCCAACATCCCAACATCATCAACCTCATAGGAGCCTGTGAAAACAGGGGGTACCTGTACATTGCCATTGAGTACGCCCCATATGGAAACCTGCTTGACTTCTTGCGTAAGAGCCGGGTCCTCGAGACAGACCCTGCCTTCGCCAAGGAGCACGGCACTGCCTCCACCCTCACCTCACAACAACTGCTGCAGTTCGCTGTCGACGTGGCCACTGGCATGCACTACCTTAGCGACAAACAGttcatCCACAGAGACCTGGCAGCGAGGAACGTTTTAGTGGGAGACAACCTAGTGGCCAAGATAGCAGACTTCGGTCTGTCCCGAGGGGAGGAGGTCTACGTCAAAAAGACCATGGGGAGGTTGCCAGTGCGTTGGATGGCGATAGAGTCCCTAAACTACAGTGTGTACACCATCAAGAGTGACGTGTGGTCTTTTGGTGTACTTCTATGGGAGATAGTGAGTTTAGGTGGTACTCCTTACTGTGGGATGACCTGTGCTGAGCTCTATGAGAAACTCCCTCAGAGCTACAGGATGGAACAGCCCAGGAACTGTGACGACGAAGTgTATGAGTTAATGAGGCAGTGCTGGAGAGACCGGCCGCATGAGAGACCTCCTTTCTCTCAGATCTCTGTACAGCTCAACAGGATGCAGGAGGCCAGGAAGGCCTACGTGAACATGGCGCTCTTCGAGAACTTCACCTACGCCGGGATAGACGCCACGGCCGAGGAGGCCTGACTACCAGCCCCCACAGCCCCCGGCAGGTCTCGTAGCCCACAGGAGAGGCCCCGTGGCTCAGCCCTGCGTTACTGCCGCCCCCCAGCTGCTGCCCAACGTGGGGACCGATGGAGTAGCAGACAATCCACCTGGACCACAAGGGTAAAGAGGGAGGACTGTGAAAGGACACTGTGGAGGTCTTATGGGGGCTGGGAAGGGAGATGTGGAACTGGACACTGCAGTCCTTTCTGAAGGAAAGTATAGAAGAATGAGGGGCTGCATGACGTGCTTAACAACCCTGCCAGGTGGGTTGGCGGGTGGGGCTGAGGGTTGCCTTTGGGCGTATTTGGGAAATGTGACACTAGTCTTGGGACACGTTGTGGTCCTTGTTTGAAGGACAGGATGGACAAGGAAGATGCTCCATGACATGATACTACACTGCCGGAGTCACATGCTATTACACTGCCAGAGTCTGACGGGTGCTCAATGAACTTACAAGCCCTTCATCAAAACGGAGAGAGGACTTTTTTTGTGGACATATGCCCACACGTGTAGTTAGCCGTCCATTCTGAGATGGATCCGActgggggagaaaaaaaacaatgttgCACTTGTCTATTCacttatttcttgttttgttttaggggagagtggggtaagttgaacacttttttacattcattatcactCCGTTAAGGGAAATATAGTATCTTTCCATCAacgatatctacatatatttccggatgttgtgtatccctggaaataataaATATGCATGTAAACattagttttgaaaacatagcgtGAGCAAAAAAAGTAGGCTCTTGGTGCCACCTACCTCTGTACTGAATGAACTATTACcactacattttttaaatcatcaagcatattttaacacaggcttaataCCGAACAAACACTTTATTCTCGTTTTTGACACTTTTAACATAGGCCCTGTCGTCACCTCATATCCCAGTGATAATGCCATGCATTATgcctggaaagaaaacacttgaatttgctcaacttgccattggctcaacttaacccaaggcaaacattttgactatattagcccacacagctacaaggatgcactttcatgctcgGTTTAGGCCctcattgtaacggttttctt
>XM_036968778.1
cCCAGAGTATCCCCATTTCACGAACAACAGATTCAGAACACTCAGATTGGAGAGGAGAATGTGAAACGGCCTGGAACAGAAACAGGGACAGAGTTATCGTCAAAAACAATTACTGGAATTTATGGAAATGCGCAAAGACGCGCGCGGTTCTTTGGCACACTGGGGACCATCGATGGAATGTAGAAGTGTCTACTTTTAAGTCAATCATTGGACACAACTGATTTCGGAATTGTCGCTGTGAGGATTACAATTATGATATACGTCTTATTTTTGTTGTGCCTCGTCCATGTGTCAGGTGCGGTGACAGACCTGACCGTCATCTCCAACGCTGAGGCCTCCACCCCTCAGCTCTTCTCCATCTCCTGCCTCACTGGGGAGCGGGATGCAGCAGAGCTAGACCTGGACATCAAGAAGGACAACAGcatcctcatcctctcctcacgGCCACGTTACAGAGTCAAAAGGCCCAAGACCAAGGAGGTGGTGGCGAACGAGTTCGTGGGTGTGATGGACCTAACAGGCATCTTCTACTGCCATGCGTCCCAGGGAACTGATCCTCTTATAAACCTGGGTAAAGTGACTCTCATCAACAACTTTGCCAAAGCCCTATTTGTCCCGGCCCACCTCACGGTGACAGCAAACAGAGGAGACACAGTTCACCTGGCCATGCAGGTCCTGAGCTCCCAGAGACGAGACGTCACCTGGAAATACAACGGTAACTATCACTACACGACCCACTGGGGTGATGTGTCCAACAGTACGGCTGTACTAACCCTGGAGGATGTGGCTAAAGCCAACGAGGGCATCTACAGTGCCAGCTTCGTGGGAGACAGTCCCATCAATGGAGCCTGGATGAGGCTGATTGTCAGAGACTGTGGCAGTAAGAAGTGGGGTGCCGACTGTGACAAGGACTGTCCAGAGTGTCTCAACGGAGGGGTGTGTCACCACCGGGACGGGGACTGCATCTGCCCACCGGGGTTCATGGGGATGCGCTGCGAGacagCCTGTAGAGAGGGAATGTTTGGGCTTAACTGCCAGGAGTCATGCAAGCCAGAGATGGACTGTAGAGGGCTGAGGTTCTGCCTGGCTGACCCTTACGGATGCTCCTGTGCCAGTGGCTGGTCTGGAAACCACTGCAACAGATtCTGCCACAAGGACATGTACGGGGCAGACTGCAGGCTGCGCTGTAAGTGTAAGAACGGTGGAGTGTGTAACCACTTCAGTGGATGCCAGTGTCCCACTGGCTGGAGAGGACGGCACTGTGAGAAATCAGACCGCGCCCCCCAGATCTTGGACATGGCCAGTGGTCTAGAGTGGAACCTTCACTCCAGCCCCAAGATCCTGTGTTCCGCCACAGGCAACCCCCTGCCCAGTCACGGCAGCATTGAGCTGCGCAAACTGGACAGCACTGTGCTCAAGGCGTCTCGTACTACCATGGACTCCAATAAGAGCACAGCCCAGTTTGATATTCCCCGTCTGTCCACTGAGCATGCTGGGTTATGGGAGTGTAGGGTTTCCACCAATGGGGGACAAGACTCAAGGAAGTTCAACCTCAGTGTCAAAGAGCCACCATGCCCCAGCACCCCTCCCAAGCTGCTGGAGAAGAGGAGTAAGCAGCTGGTGGTGATGCCTGTGGAGTCCTACAGAGGAGACGGACCCATCGACTCCACCAAGCTCCTCTACAAGCCCATGGAGACAGGAGACTCCTGGTCCTCCATCATAGTGTACAGTAGAGAGCCTATAACTCTGATGAATCTGAAGCCATCTACACGCTACCACGTCCGTGTCCAGCTGACCCgtcctggggagggaggggaggggactcTGGGGCCTGAGGCCATCATGGAGACTGACTGTCCAGAGCCCACTCTTCGACCAGAGATTGACTTCAGCTCGCTGGAGGGCCGCAACGCCACTGTGCGCTGGCTGTTGCATGGCAACGCGGACAGGGCCAGCGGGTTCTTAGTGCAGCTCTTCGGGCCCTCCCCCTCAGGAGAGAAGCTGAGAGAGGAGACCACCCTGCTCAATGTGCTCTCCACCAAGTTCTACAACCTGCAGTACCACCAAGACTACACAGTGGTCGTCAGGCTGCTCAACTGTGGCAGTCTGGGGCCCGCCTCTAAGCCGTACAATATCCGCATAAACAGCCAGGgtCCCTCATCCCCTCGGAACGTCCAGGCTCTGCCCCTGTCTGTGTCTGCGGTGCAGGTGAAGTGGCAGCCCCCTGAGGACTCTAACGGGGGCATAGTAAAGTACATCATAGAGTACCAGTCGGTGGGACAGGGCAGCCTGCACCCCTGGGTCGACACAGACGATGGCAACAAGACAGCTAAAGATGTGACAGCGCTCAACGGGAGTACTCTCTACCAGTTCAGAGTGAGGGCCTTCTCTAAAGTACCCGGGGAGTGGAGCAAGTTTGTCCATGCCAGGACCcagggagatgGTCCCCAGGACTTCACTCCTACCACCCAGGGTGTGGGGGGGCTTCCAGGCAGTGAGGGCTACCATTTGTTGGTAGCTGTGGTGGGGTCTGTGACGGTCACCTGTGTCACCATCCTGCTGGCCCTGCTGGCTCTCTTCTGCATCCGCAAAACTCTGCTCAACCGCAGACGCACCTTCACTTACCAGTCTGGAtcgGGAGAGGAGACCATCCTTCAGTTTAACTCTGGGACCCTGACCCTGACAAGGAGGCCGAAGCCTACCTCTGAGCCCCTCACCTACCCCATCCTGGAGTGGGATGACATCAAGTTTGAAGATGTGATCGGAGAGGGCAACTTCGGACAGGTCATCAAGGCCATGATCAAGAAGGACGGGGCCAAGATGAGCGCTGCTATCAAGATGCTAAAAGAGTTTGCCTCGGAGAATGACCACCGGGACTTTGCAGGAGAGCTGGAAGTGTTGTGTAAACTGGGCCAACATCCCAACATCATCAACCTCATAGGAGCCTGTGAAAACAGGGGGTACCTGTACATTGCCATTGAGTACGCCCCATATGGAAACCTGCTTGACTTCTTGCGTAAGAGCCGGGTCCTCGAGACAGACCCTGCCTTCGCCAAGGAGCACGGCACTGCCTCCACCCTCACCTCACAACAACTGCTGCAGTTCGCTGTCGACGTGGCCACTGGCATGCACTACCTTAGCGACAAACAGttcatCCACAGAGACCTGGCAGCGAGGAACGTTTTAGTGGGAGACAACCTAGTGGCCAAGATAGCAGACTTCGGTCTGTCCCGAGGGGAGGAGGTCTACGTCAAAAAGACCATGGGGAGGTTGCCAGTGCGTTGGATGGCGATAGAGTCCCTAAACTACAGTGTGTACACCATCAAGAGTGACGTGTGGTCTTTTGGTGTACTTCTATGGGAGATAGTGAGTTTAGGTGGTACTCCTTACTGTGGGATGACCTGTGCTGAGCTCTATGAGAAACTCCCTCAGAGCTACAGGATGGAACAGCCCAGGAACTGTGACGACGAAGTgTATGAGTTAATGAGGCAGTGCTGGAGAGACCGGCCGCATGAGAGACCTCCTTTCTCTCAGATCTCTGTACAGCTCAACAGGATGCAGGAGGCCAGGAAGGCCTACGTGAACATGGCGCTCTTCGAGAACTTCACCTACGCCGGGATAGACGCCACGGCCGAGGAGGCCTGACTACCAGCCCCCACAGCCCCCGGCAGGTCTCGTAGCCCACAGGAGAGGCCCCGTGGCTCAGCCCTGCGTTACTGCCGCCCCCCAGCTGCTGCCCAACGTGGGGACCGATGGAGTAGCAGACAATCCACCTGGACCACAAGGGTAAAGAGGGAGGACTGTGAAAGGACACTGTGGAGGTCTTATGGGGGCTGGGAAGGGAGATGTGGAACTGGACACTGCAGTCCTTTCTGAAGGAAAGTATAGAAGAATGAGGGGCTGCATGACGTGCTTAACAACCCTGCCAGGTGGGTTGGCGGGTGGGGCTGAGGGTTGCCTTTGGGCGTATTTGGGAAATGTGACACTAGTCTTGGGACACGTTGTGGTCCTTGTTTGAAGGACAGGATGGACAAGGAAGATGCTCCATGACATGATACTACACTGCCGGAGTCACATGCTATTACACTGCCAGAGTCTGACGGGTGCTCAATGAACTTACAAGCCCTTCATCAAAACGGAGAGAGGACTTTTTTTGTGGACATATGCCCACACGTGTAGTTAGCCGTCCATTCTGAGATGGATCCGActgggggagaaaaaaaacaatgttgCACTTGTCTATTCacttatttcttgttttgttttaggggagagtggggtaagttgaacacttttttacattcattatcactCCGTTAAGGGAAATATAGTATCTTTCCATCAacgatatctacatatatttccggatgttgtgtatccctggaaataataaATATGCATGTAAACattagttttgaaaacatagcgtGAGCAAAAAAAGTAGGCTCTTGGTGCCACCTACCTCTGTACTGAATGAACTATTACcactacattttttaaatcatcaagcatattttaacacaggcttaataCCGAACAAACACTTTATTCTCGTTTTTGACACTTTTAACATAGGCCCTGTCGTCACCTCATATCCCAGTGATAATGCCATGCATTATgcctggaaagaaaacacttgaatttgctcaacttgccattggctcaacttaacccaaggcaaacattttgactatattagcccacacagctacaaggatgcactttcatgctcgGTTTAGGCCctcattgtaacggttttctt

Function

NR:

description
tyrosine-protein kinase receptor Tie-1-like

GO: NA

KEGG:

id description
K05120 TIE1; tyrosine kinase receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968777.1 False 4765 mRNA 0.53 23 39877845 39906318
XM_036968778.1 True 4762 mRNA 0.53 23 39877845 39906318

Neighbor

gene id symbol gene type direction distance location
LOC110521817 LOC106584021 coding upstream 69195 39800038 ~ 39812756 (+)
LOC110521003 LOC106584022 coding upstream 78363 39772446 ~ 39799482 (+)
trnaa-ugc-194 NA coding upstream 88616 39789157 ~ 39789229 (+)
LOC110521815 fam183a coding upstream 116216 39759901 ~ 39761629 (+)
LOC110521814 dmrt2b coding upstream 154918 39713024 ~ 39722927 (+)
LOC110521821 LOC106584017 coding downstream 5199 39911517 ~ 39918494 (+)
LOC110521822 pr38a coding downstream 14546 39920864 ~ 39924501 (+)
LOC110521823 pomgnt1 coding downstream 24688 39931006 ~ 39957917 (+)
LOC118945792 NA coding downstream 52979 39959297 ~ 39960096 (+)
pik3r3b LOC106584012 coding downstream 237272 40143590 ~ 40468579 (+)
G2234003 LOC106584020 non-coding upstream 22748 39852450 ~ 39855097 (+)
G2234002 LOC106584020 non-coding upstream 25575 39850597 ~ 39852270 (+)
G2233878 NA non-coding upstream 233978 39643647 ~ 39643867 (+)
G2233874 NA non-coding upstream 236610 39640921 ~ 39641235 (+)
G2234031 NA non-coding downstream 4680 39910998 ~ 39911462 (+)
G2234224 NA non-coding downstream 22994 39929312 ~ 39929520 (+)
G2234313 LOC100194703 non-coding downstream 193462 40099780 ~ 40100114 (+)
G2234323 NA non-coding downstream 206455 40112773 ~ 40113015 (+)
G2234330 NA non-coding downstream 218230 40124548 ~ 40124761 (+)
LOC110521001 LOC106584026 other upstream 701152 39117484 ~ 39202411 (+)
G2232855 LOC100380853 other upstream 1064466 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 1087170 38790315 ~ 38790675 (+)
G2231371 NA other upstream 1540864 38315783 ~ 38336981 (+)
LOC110521828 LOC106584006 other downstream 1196120 41101017 ~ 41158001 (+)
G2236045 NA other downstream 1479342 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2644002 42548328 ~ 42554269 (+)
G2237341 NA other downstream 2823534 42729852 ~ 42730451 (+)

Expression


Co-expression Network