LOC110521839 (LOC106583969)


Basic Information

Item Value
gene id LOC110521839
gene name LOC106583969
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 42526928 ~ 42550858 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599751.2
GTTGGAAAAAGAGTGAACGGTGCGCTTTACAATGGATTAAAAACCTGCACATGTAGATAGACACCTGGCGTGCGCATCCACTATGCGCCCACGGGCACGTCCAATATGCAATGGAATTGATAATGCACCTTGGTTTTCATTTTTAGTAGTTTATCAGGTAAACTAACGGGTAAGAATGTTGAGGTTGAGAACAGTGCTGCTGACTCCAATTAGATTAGATTATTGGATTGGCTGCAACAGATTATAGCGCGCCTGCTTCCAAGACGCAGTATACCGAGGAAGACGCGTATGATCTAACAATTTTACCCCTGTGGACTTCGACAATAATAAGGGGCAGCCATGCTGACCACCTTAATGGACGGCCTCCTCTGCTGCCTGACGGGGAAGTCGGCCAACGTTGTGGTTCCCATAGAAACCTCAGAACCCGCTGACGGCTACGAGTTTGTGGAGGTCAAACCAGGTCGCGTCCTGAGGGTCCGACATGTCATTCCGGAacgggaggtggaggaagagccCAGCGGGCCAGGGGGAAGCGTCCACTGCAAGAGGAAGATCACAGTGTATCGTAACGGACAGCTACTGATAGAAAACCTGGGGGATGCGGTTAAACAGGAGCGGTTACATGCTCCGAACGGAGAAGCAGAACCGAACTGTACAGTAGAGGTAGAGCTCGCAGACCCACCTTCCAATCCAACTCCCAATTCTGACACTAAAGTGGACAAGACAGGGTCAGTGATTGGGGCAGGGGGAGCAGCAACAGCTCCAGATCTGACCCAGCAGCCCCGGAAGCGACGGCGGAAGCCCAAGCGCACAGTGGTGATCGACAGCGAGAGGAAGATCACATCGTGTAAGGGGACACACGCGGACGTGGCACTGTTCTTTGTGCACGGTGTGGGCGGCTCGCTGGACATCTGGGGCAGTCAGCTGGACTTCTTCTTCCGTCTGGGCTATGAGGTCATCGTGCCAGATCTGGTAGGTCACGGGGCGAGCTCGGCGCCCCAGATCGCGGCGGCATACACGTTCTATGCCCTGGCCGAGGACATGAGGGCCATCTTTAAGAGATATGCACGGAAAAGGAACATTCTCATCGGACATTCTTATGGTGTGTCATTCTGTACATTCCTGGCCCATGAGTACCCGGACCAGGTCCACAAGGTGGTGATGATAAACGGAGGAGGCCCCACAGCCCTGGAGCCCAGCCTTTGTTCCATTTTCAACCTGCCCACCTGCGTCCTGCactgcctctccccctgcctctcctggAGCTTTCTCAAGGCTGGATTTGCCCATCAGGGTGCAAAGGAGAAGCAGCTGTTGAAAGACAACAATGCTTTCAACGTGTCCTCCTTCGTGCTGCGTGCCATGATGAGTGGCCAGTACTGGCCAGAGGGCGACGAGGTGTACCATGCAGAGATCACTGTGCCCATCCTACTGGTGCACGGCATGTACGACAAGTTTGTGCCCGTGGAGGAGGATCAACGCATggcagagaTCTTGCTGCTGGCCTTCCTGAAGATAATCAATGAGGGCAGTCACATGGTGATGATGGAGTGTCCCGAGAGCGTCAACACCCTCCTGCACGAGTTCTTCCTCTGGGAGCCAGACTCCGCTCCTAAATCTAAACCACGATCTGAAACCGCCAATGCATCCAACGGGGGAGCAACTTCAGAAAGCCAAGCCAAGAATAAGTAGCCCATAGAAGGATGGATGTGTGTTATTGACTCCAATCAAAGCTTGCACAGCCAGTGATGTGTACTGTCTACCATGGCTGGTAGTGCTAGGCGTGTCTCCTCGGGTGCAGGGAGCTGGTTTGAGTCGGTTTgaactgggctgggctggtttaAGATTGAGATTTGAGGAGGTGGAACACAGTACACAGGGACAGATGGGTCTATATTTGGTCTAAGTCTGAGCCACTGCACTACATCAGAGGAAGGACAAGAGGGATGcgagggagggtgaggagggacgGATAGATGGACGTCAATGACGTTGACCGTGGAGGTCTATTGTATTGTTCTGACCTGTTCTGATTGAGTGACTGATCCCTGACTGTGCCTTGGGGTGGCGTGGGGCTGAAGAGGTGCTGagttgtagaggtggacctgatAATGTTATTGGTTTTGTGTGTTGCGTGTGGTACACCTCTAGTTGCACAATGGGTGGAAATGTCAAAACAAGGGTGGAtcagagagggaagagaatgtATTGGAAGTGGTCAAGTCACACAAGACAATAACTAGCCAAGAAGAACGCTTGTTATACTACTCAAGCCAAAGGTTAGCCAATGTTTGTGACAAGCAACACCAGAAccaactttcttttttttctgaccactttttttttttctgaTCACATTTGAATATTTGAAACTTCACAACATTGTGACTCAAGTTGAATGAGACATTTGAAATGATGTTCGACCATCAATGCTGCTTTTTGAGAACGAGCCAACTCCAATGTATTTAAATGCATTATTCAAACGCACTTCCCTGTCAGAATCATTGCAAATGACAAGCCATTTCTTGACATTGACAATGTTTTGCTTTGTCTACTGAGAAACAACTTGAGGGACAGGGGAAATACCAATGTGTGACTGTTTTACAAAGTCTTCTTGTGTATTTTATGGGAAAAACAAAAATGTTTCCTTTGGCTGCTGGTTAACTGGGAAGTACAAACTGGTAGATATCAATGTGTGTTTTGGGCCCTTTTTAGAAGGATTATTTTTCTTGCTGTTTATTCATATTCCTCTACAAAACTATGCTGAACAATGATTGTTTACCTTTTTTTCAGGTAAAAGTGATATAAGCTATGAAAATGTTTATTGGTACACCAAAATATGGTACACCAAAAATGTTTGTAAAATCGGAGAATTCTTCAATACCACATAGCAAGCTCTCCGTCATGTaactactgaacaaaaatgtaaacaaaaatgtaaagtgttggttccatgttttatgagctgaaataaaagatcccagaaatgttctatatgca
>XM_021599752.2
tatctgtctcattgttatgTGATACAAGCTAGCTAACTAAGTATTTAATACAACACATGAACGTTACCAATAAGACAGAAAGCGAGCAAGCTACTTCAGATCATACAATTAAATAACTGAAAAATGAACAGCCATATGATGAGATCACTGAACTGacattagctaacgttatctTGCTAAGCTGCCAGCTAGGTAGCTGCTTTCTCTTCGCAAAACGTTTTGCCGGGGCAGCCATGCTGACCACCTTAATGGACGGCCTCCTCTGCTGCCTGACGGGGAAGTCGGCCAACGTTGTGGTTCCCATAGAAACCTCAGAACCCGCTGACGGCTACGAGTTTGTGGAGGTCAAACCAGGTCGCGTCCTGAGGGTCCGACATGTCATTCCGGAacgggaggtggaggaagagccCAGCGGGCCAGGGGGAAGCGTCCACTGCAAGAGGAAGATCACAGTGTATCGTAACGGACAGCTACTGATAGAAAACCTGGGGGATGCGGTTAAACAGGAGCGGTTACATGCTCCGAACGGAGAAGCAGAACCGAACTGTACAGTAGAGGTAGAGCTCGCAGACCCACCTTCCAATCCAACTCCCAATTCTGACACTAAAGTGGACAAGACAGGGTCAGTGATTGGGGCAGGGGGAGCAGCAACAGCTCCAGATCTGACCCAGCAGCCCCGGAAGCGACGGCGGAAGCCCAAGCGCACAGTGGTGATCGACAGCGAGAGGAAGATCACATCGTGTAAGGGGACACACGCGGACGTGGCACTGTTCTTTGTGCACGGTGTGGGCGGCTCGCTGGACATCTGGGGCAGTCAGCTGGACTTCTTCTTCCGTCTGGGCTATGAGGTCATCGTGCCAGATCTGGTAGGTCACGGGGCGAGCTCGGCGCCCCAGATCGCGGCGGCATACACGTTCTATGCCCTGGCCGAGGACATGAGGGCCATCTTTAAGAGATATGCACGGAAAAGGAACATTCTCATCGGACATTCTTATGGTGTGTCATTCTGTACATTCCTGGCCCATGAGTACCCGGACCAGGTCCACAAGGTGGTGATGATAAACGGAGGAGGCCCCACAGCCCTGGAGCCCAGCCTTTGTTCCATTTTCAACCTGCCCACCTGCGTCCTGCactgcctctccccctgcctctcctggAGCTTTCTCAAGGCTGGATTTGCCCATCAGGGTGCAAAGGAGAAGCAGCTGTTGAAAGACAACAATGCTTTCAACGTGTCCTCCTTCGTGCTGCGTGCCATGATGAGTGGCCAGTACTGGCCAGAGGGCGACGAGGTGTACCATGCAGAGATCACTGTGCCCATCCTACTGGTGCACGGCATGTACGACAAGTTTGTGCCCGTGGAGGAGGATCAACGCATggcagagaTCTTGCTGCTGGCCTTCCTGAAGATAATCAATGAGGGCAGTCACATGGTGATGATGGAGTGTCCCGAGAGCGTCAACACCCTCCTGCACGAGTTCTTCCTCTGGGAGCCAGACTCCGCTCCTAAATCTAAACCACGATCTGAAACCGCCAATGCATCCAACGGGGGAGCAACTTCAGAAAGCCAAGCCAAGAATAAGTAGCCCATAGAAGGATGGATGTGTGTTATTGACTCCAATCAAAGCTTGCACAGCCAGTGATGTGTACTGTCTACCATGGCTGGTAGTGCTAGGCGTGTCTCCTCGGGTGCAGGGAGCTGGTTTGAGTCGGTTTgaactgggctgggctggtttaAGATTGAGATTTGAGGAGGTGGAACACAGTACACAGGGACAGATGGGTCTATATTTGGTCTAAGTCTGAGCCACTGCACTACATCAGAGGAAGGACAAGAGGGATGcgagggagggtgaggagggacgGATAGATGGACGTCAATGACGTTGACCGTGGAGGTCTATTGTATTGTTCTGACCTGTTCTGATTGAGTGACTGATCCCTGACTGTGCCTTGGGGTGGCGTGGGGCTGAAGAGGTGCTGagttgtagaggtggacctgatAATGTTATTGGTTTTGTGTGTTGCGTGTGGTACACCTCTAGTTGCACAATGGGTGGAAATGTCAAAACAAGGGTGGAtcagagagggaagagaatgtATTGGAAGTGGTCAAGTCACACAAGACAATAACTAGCCAAGAAGAACGCTTGTTATACTACTCAAGCCAAAGGTTAGCCAATGTTTGTGACAAGCAACACCAGAAccaactttcttttttttctgaccactttttttttttctgaTCACATTTGAATATTTGAAACTTCACAACATTGTGACTCAAGTTGAATGAGACATTTGAAATGATGTTCGACCATCAATGCTGCTTTTTGAGAACGAGCCAACTCCAATGTATTTAAATGCATTATTCAAACGCACTTCCCTGTCAGAATCATTGCAAATGACAAGCCATTTCTTGACATTGACAATGTTTTGCTTTGTCTACTGAGAAACAACTTGAGGGACAGGGGAAATACCAATGTGTGACTGTTTTACAAAGTCTTCTTGTGTATTTTATGGGAAAAACAAAAATGTTTCCTTTGGCTGCTGGTTAACTGGGAAGTACAAACTGGTAGATATCAATGTGTGTTTTGGGCCCTTTTTAGAAGGATTATTTTTCTTGCTGTTTATTCATATTCCTCTACAAAACTATGCTGAACAATGATTGTTTACCTTTTTTTCAGGTAAAAGTGATATAAGCTATGAAAATGTTTATTGGTACACCAAAATATGGTACACCAAAAATGTTTGTAAAATCGGAGAATTCTTCAATACCACATAGCAAGCTCTCCGTCATGTaactactgaacaaaaatgtaaacaaaaatgtaaagtgttggttccatgttttatgagctgaaataaaagatcccagaaatgttctatatgca

Function

NR:

description
protein ABHD8-like

GO: NA

KEGG:

id description
K13701 ABHD8; abhydrolase domain-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599751.2 False 3000 mRNA 0.48 5 42526928 42534137
XM_021599752.2 True 2894 mRNA 0.48 5 42526928 42550858

Neighbor

gene id symbol gene type direction distance location
LOC110521837 NA coding downstream 214497 42294701 ~ 42312431 (-)
LOC110521836 LOC106583981 coding downstream 258070 42256238 ~ 42268858 (-)
LOC110521834 nek7 coding downstream 296066 42100595 ~ 42230862 (-)
LOC110521004 LOC106560548 coding downstream 519695 42006194 ~ 42007233 (-)
LOC110521833 LOC106583974 coding downstream 941077 41564483 ~ 41585851 (-)
LOC110521841 LOC106583966 coding upstream 6023 42556881 ~ 42616724 (-)
LOC110521848 LOC106583960 coding upstream 513398 43064256 ~ 43082034 (-)
LOC118945796 NA coding upstream 582415 43133273 ~ 43134588 (-)
LOC110521850 LOC106583957 coding upstream 589860 43140718 ~ 43144980 (-)
LOC110521851 LOC106583956 coding upstream 601537 43152395 ~ 43175237 (-)
G2237673 NA non-coding downstream 14390 42512332 ~ 42512538 (-)
G2237670 NA non-coding downstream 17788 42508889 ~ 42509140 (-)
G2237501 NA non-coding downstream 247359 42279350 ~ 42279569 (-)
G2237492 NA non-coding downstream 254053 42272647 ~ 42272875 (-)
G2237786 NA non-coding upstream 154861 42705719 ~ 42706176 (-)
G2237799 NA non-coding upstream 171983 42722841 ~ 42723305 (-)
G2237817 NA non-coding upstream 196845 42747703 ~ 42747966 (-)
G2238226 LOC106583964 non-coding upstream 203410 42754268 ~ 42783111 (-)
G2238258 NA non-coding upstream 267636 42818494 ~ 42818732 (-)
G2237502 NA other downstream 245566 42280756 ~ 42281362 (-)
G2234837 NA other downstream 2240646 40285654 ~ 40286282 (-)
G2234611 NA other downstream 2533014 39956915 ~ 39993914 (-)
LOC110521806 NA other downstream 3670237 38838904 ~ 38856693 (-)
G2232820 NA other downstream 3759025 38765422 ~ 38767903 (-)
G2237814 NA other upstream 192036 42742894 ~ 42743592 (-)
G2239635 LOC106583937 other upstream 1731278 44282136 ~ 44283368 (-)
G2240022 aldoa other upstream 2179375 44721963 ~ 44733310 (-)
LOC110521015 LOC106583894 other upstream 2418864 44950503 ~ 45003269 (-)
LOC110521929 LOC106583891 other upstream 3324413 45875271 ~ 45885821 (-)

Expression


Co-expression Network