LOC110515334 (LOC100136747)


Basic Information

Item Value
gene id LOC110515334
gene name LOC100136747
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 43566590 ~ 43576447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969106.1
AGGCACTGCTCCTGGGTGGTCTGCCTGAGGAGGGTCTGGCTAGAGCTGGAGTAAAAGTAATCAGCAAAGTTCTTATCAGTGCAGTTGCAGAGAATACCTACTTGCTGAAGCTTGTGAACCCTGAGATCTTTGAGTACAGTGGTGTGTGGCCCAAAGATCCTTTCGTCCCAGCTGCAAAACTCACTTCAGCCCTGGCTGCTCAGTTCTCGATTCCCATCAAGTTTGAGTATGCCAAGGGTGTTGTGGGTAAGGTATTTGCCCCCACTGCTGTCTCTGAAACAGTGCTGAATGTCCATAGAGGTATCCTGAACATTCTTCAGCTCAACATCAAGAAGACACAAAACGTCTATGAGTTGCAGGAGGCTGGAGCTCAGGGAGTGTGCAAGACCCACTATGTGATCAGGGAAGATGCCAAGGCAGAGCGCATCCATTTGACCAAGAGCAAGGATCTCAATAACTGTCAGCAGAGAATCATGAAGGACTTTGGTCTGGCTTACACAGAGAAGTGTGTAGAGTGCCGGCAGAGAGGGGAGGCCCTGATGGGAGCTGCCACTTacaactacctcatgaagcccgCTGACAATGGTGCTCTGATCTTGGAGGCCACTGTTACTGAGCTCCATCAGTTCACACCATTCAATGAGATGTCAGGAGCTGCCCAAATGGAAGCAAAACAAATGTTGACTTTCGTTGAGATCAAGAAGGATCCAATTATTGTCCCCGATAATAACTATGTTCACCGTGGATCCATCCGGTATGAGTTTGCCACTGAGATTCTCCAGATGCCCATTCAGCTCCTTAAGATCAGCAACGCACGTGCTCAGGCTGTGAAGATCCTGAATCATCTGGTCACATACAACACGGCACCGGTCCATGAAGATGCTCCTCTTAAGTTTCTGCAGTTTATTCAGCTCCTGCGCATGGCAAGCTCTGAGACTATTAATGCCATCTGGGCTGAGTTCAAGGCCAAACCAGCttacagaaactggatcctggatgctgTCCCCTCTATCGGAAGTTCAGTGGCTGTGAGATTCATCAAGGAGAAGTTTTTGGCTGGTGACATCACTATTTTTGAGGCTGCTCAGGCTCTGGTTGCCGCTGTGCATATGGTGGCTGCTGATCTGGAGACTGTCAAGCTTGTTGAAAGCCTGGCTTTCAACCACAAGATTCAGACACACCCAGTTCTACGTGAGCTCACCATGCTTGGTTATGGTACCATGGTTTCCAAATACTGTGTTGAACATCCCAACTGCCCCGCTGAACTTGTGAAGCCCATCCACGAACTTGCTGTTCAGGCTGTTGCTAATAGCAAATTTGAGGAACTCTCCATGGTTCTTAAAGCTCTGGGTAATGCTGGCCATCCTGCTAGCATTAAACCAATCACAAAGCTCCTGCCCGTGTTTGGAACTGCAGCTGCTGCTCTGCCCCTGAGAGTCCAGGCTGATGCAGTTTTGGCCCTGAGGAACATTGCTAAGAGGGAGCCTAGAATGGTCCAGGAAGTTGCTGTGCAGTTGTTCATGGACAAGGCTCTCCACCCAGAGCTCCGCATGCTTGCCTGCATTGTTCTGTTTGAGACAAAGCCCCCAATGGGCCTGGTGATTACTTTAGCTAGCATTCTGAAAACAGAGAAAAATATGCAGGTGGCTAGCTTCACCTACTCTCACATGATGTCCCTGACCAGGAGCACCGCCCCTGACTTTGCCTCAGTTGCTGCTGCCTGCAATGTTGCTGTCAAGATGCTCAGCAACAAATTTAGAAGATTGAGCTGCCACTTCAGTCAAGCCATCCACCTGGATGCCTATTCCAATCCCCTGAGGATTGGTGCTGCTGCCAGTGCTTTCTACATCAACGATGCTGCCACCCTTTTCCCCAGAACTGTCGTGGCCAAAGCTCGCACCTACTTTGCTGGAGCAGCTGCTGATGTTCTTGAGGTTGGAGTGAGAACTGAGGGAATCCAGGAGGCTCTTCTGAAATTACCCCCAGCTCCTGAAAATGCTGACAGGATCACCAAGATGAGGCGTGTCATTAAGGCTCTGTCTGACTGGAGGTCCCTAGCCACAAGCAAGCCCCTAGCCTCCATATATGTGAAGTTCTTTGGTCAGGAAATTGCCTTTGCCAACATCGACAAGTCCATCATCGATCAGGCACTTCAGCTTGCCAACAGTCCTTCTGCACACGCTTTGGGAAGAAATGCCTTGAAGGCACTGTTGGCTGGAGCAACTTTCCAGTATGTTAAGCCCCTGCTGGCTGCAGAGGTGCGTCGCATCTTCCCCACCGCTGTTGGTTTGCCCATGGAGCTCAGTTACTACACTGCTGCTGTCGCTAAAGCATACGTCAATGTCCGTGCCACTCTGACACCTGCTCTGCCTGAAACCTTCCATGCTGCCCAGCTATTGAAAACAAACATTGAGCTACACGCCGAAGTTAGACCAAGCATTGTCATGCATACATTTGCTGTGATGGGAGTGAACACTGCATTCATCCAGGCTGCTATTATGGCAAGAGCTAAGGTCCGCACAATTGTCCCTGCAAAATTTGCAGCACAGCTTGACATCGCTAATGGCAACTTCAAGTTTGAAGCTTTCCCTGTTTCCCCTCCTGAGCATATTGCTGCCGCACACATTGAGACCTTTGCTGTGGCAAGAAATGTGGAGGATGTCCCAGCCGAGAGAATAACTCCCTTGATTCCTGCCCAAGGAGTAGCAAGAAGCACACAGCAGTCCAGGGATAAGTTAACATCTATGATTGCAGATTCTGCTGCCTCTTTTGCTGGAAGTTTGTCAAGATCTTCCGAGATCCTCTATTCTGATTTGCCATCCAACTTCAAGCCCATCATTAAGGCAATTGTAGTCCATCTTGAGGAGACAATCTGTGTCGAAAGGCTTGGAGTCAAAGCATGCTTTGAATTTACCTCAGAGAGTGCTGCCTTCATCAGAAACACTcttttctacaacatgattggaaaGCATTCAGTCCTTATTTCTGTGAAACCATCAGCATCTGAACCCGCCATCGAGAGGCTGGAGTTTGAAGTGCAAGTTGGACCCAAGGCTGCAGAAAAGATTATCAAAGTCATCACCATGAACGAAGAGGAGGAAGCTCCCGAGGGAAAAACTGTACTGTTGAAGCTCAAGAAAATTCTGCTGCCTGATCTGAAGAACGGCACCAGAGCTTCCTCTAGTTCCAGCAGCTCTAGTTCCAGCAGCTCTCGCTCTAGTAGTTCCCGCTCTAGATCCAGAAAATCAGAGAGCAGCAGCTCTTCCAGCTCCTCCAGCTCTCGCATCTCCAAGCGTGACGGCCCCGACCAGCCTTACAACCCCAACGACCGCAAATTCAAAAAGAATCACAAGGACTCTCAATCCACCTCCAATGTCATCTCCAGAAGCAAGAGCAGTGCCTCTAGCTTCCATGCCATCTACAAGCAGGACAAATTCCTTGGCAATAAACTTGCCCCTATGGTGATCATCCTCTTCCGTTTAGTGAGAGCTGACCATAAGATAGAGGGATACCAGGTTACTGCTTACTTGAACAAAGCTACTTCCAGACTGCAGATCATTATGGCTGCCCTTGATGAGAACGACAACTGGAAACTGTGTGCTGATGGTGTTCTGCTCAGCAAACACAAAGTCACTGCCAAGATTGCTTGGGGGGCAGAGTGCAAGGATTATAACACCTTTATCACTGCTGAGACTGGTCTTGTTGGTCCAAGCCCTGCAGTTCGTCTGAGGTTGTCTTGGGACAAACTCCCCAAGGTTCCCAAGGCTGTTTGGCGCTATGTTAGGATCGTGTCTGAATTCATCCCTGGGTACATCCCATATTACCTGGCTGACTTGGTTCCAATGCAAAAAGACAAAAATAATGAGAAACAGATTCAATTCACTGTGGTTGCCACATCTGAAAGGACCCTGGATGTCATTCTGAAAACACCCAAGATGACACTGTATAAACTGGGTGTGAACCTCCCCTGTTCTCTGCCATTTGAGTCTATGACTGATCTTTCTCCCTTTGATGACAACATTGTTAACAAAATCCACTACTTGTTTTCTGAAGTCAACGCAGTTAAATGTAGCATGGTCAGAGACACATTGACAACATTTAACAACAAGAAGTACAAGATCAACATGCCTCTCTCCTGCTACCAAGTTTTGGCTCAGGATTGCACCACAGAGCTCAAATTCATGGTTCTGCTGAAGAAGGATCATGCATCTGAACAAAACCACATCAATGTGAAAATCTCTGACATCGATGTTGACCTGTACACTGAAGACCATGGTGTGATAGTGAAGGTCAATGAAATGGAAATTTCCAACGACAACCTCCCATACAAGGACCCCTCAGGTTCTATCAAGATCGATCGGAAGGGTAAAGGCGTGTCTCTCTATGCCCCAAGCCATGGTCTCCAAGAAGTCTACTTTGATAAGTACTCATGGAAGATTAAAGTTGTGGACTGGATGAAGGGACAGACCTGTGGACTCTGTGGAAAGGCTGATGGCGAAAACAGACAGGAGTACCGTACACCCAGTGGCCGCCTGACCAAGAGCTCAGTCAGCTTTGCCCATTCCTGGGTGCTTCCTTCTGATAGCTGCCGCGATGCGTCTGAATGTCTCATGAAGCTCGAGTCTGTGAAGCTGGAGAAGCAGGTGATTGTTGATGACAGGGAGTCCAAATGCTACTCTGTTGAGCCTGTGCTGCGCTGTCTGCCTGGATGCCTCCCAGTGAGGACCACCCCCATCACCATCGGTTTCCACTGCCTGCCCGTCGATTCCAACCTGAACCGCTCTGAAGGTCTGAGCAGCATCTATGAGAAGAGTGTGGACCTGATGGAGAAGGCAGAAGCCCATGTGGCCTGTCGCTGCTCTGAGCAGTGCATGTAGTGCTGTGGTGGAGCAGATACTGTAACTTTTATAACAGAAAATATGTAATTTCACATCACTGAGATGTAACCTACAACATTATTGACCACTCAAATTGTAATAAATCCAACTGTGCATTCAAA
>XM_036969105.1
TCAAACAAAGACACAATGACAGAAAACCTTTTTTTcagaaactggatcctggatgctgTCCCCTCTATCGGAAGTTCAGTGGCTGTGAGATTCATCAAGGAGAAGTTTTTGGCTGGTGACATCACTATTTTTGAGGCTGCTCAGGCTCTGGTTGCCGCTGTGCATATGGTGGCTGCTGATCTGGAGACTGTCAAGCTTGTTGAAAGCCTGGCTTTCAACCACAAGATTCAGACACACCCAGTTCTACGTGAGCTCACCATGCTTGGTTATGGTACCATGGTTTCCAAATACTGTGTTGAACATCCCAACTGCCCCGCTGAACTTGTGAAGCCCATCCACGAACTTGCTGTTCAGGCTGTTGCTAATAGCAAATTTGAGGAACTCTCCATGGTTCTTAAAGCTCTGGGTAATGCTGGCCATCCTGCTAGCATTAAACCAATCACAAAGCTCCTGCCCGTGTTTGGAACTGCAGCTGCTGCTCTGCCCCTGAGAGTCCAGGCTGATGCAGTTTTGGCCCTGAGGAACATTGCTAAGAGGGAGCCTAGAATGGTCCAGGAAGTTGCTGTGCAGTTGTTCATGGACAAGGCTCTCCACCCAGAGCTCCGCATGCTTGCCTGCATTGTTCTGTTTGAGACAAAGCCCCCAATGGGCCTGGTGATTACTTTAGCTAGCATTCTGAAAACAGAGAAAAATATGCAGGTGGCTAGCTTCACCTACTCTCACATGATGTCCCTGACCAGGAGCACCGCCCCTGACTTTGCCTCAGTTGCTGCTGCCTGCAATGTTGCTGTCAAGATGCTCAGCAACAAATTTAGAAGATTGAGCTGCCACTTCAGTCAAGCCATCCACCTGGATGCCTATTCCAATCCCCTGAGGATTGGTGCTGCTGCCAGTGCTTTCTACATCAACGATGCTGCCACCCTTTTCCCCAGAACTGTCGTGGCCAAAGCTCGCACCTACTTTGCTGGAGCAGCTGCTGATGTTCTTGAGGTTGGAGTGAGAACTGAGGGAATCCAGGAGGCTCTTCTGAAATTACCCCCAGCTCCTGAAAATGCTGACAGGATCACCAAGATGAGGCGTGTCATTAAGGCTCTGTCTGACTGGAGGTCCCTAGCCACAAGCAAGCCCCTAGCCTCCATATATGTGAAGTTCTTTGGTCAGGAAATTGCCTTTGCCAACATCGACAAGTCCATCATCGATCAGGCACTTCAGCTTGCCAACAGTCCTTCTGCACACGCTTTGGGAAGAAATGCCTTGAAGGCACTGTTGGCTGGAGCAACTTTCCAGTATGTTAAGCCCCTGCTGGCTGCAGAGGTGCGTCGCATCTTCCCCACCGCTGTTGGTTTGCCCATGGAGCTCAGTTACTACACTGCTGCTGTCGCTAAAGCATACGTCAATGTCCGTGCCACTCTGACACCTGCTCTGCCTGAAACCTTCCATGCTGCCCAGCTATTGAAAACAAACATTGAGCTACACGCCGAAGTTAGACCAAGCATTGTCATGCATACATTTGCTGTGATGGGAGTGAACACTGCATTCATCCAGGCTGCTATTATGGCAAGAGCTAAGGTCCGCACAATTGTCCCTGCAAAATTTGCAGCACAGCTTGACATCGCTAATGGCAACTTCAAGTTTGAAGCTTTCCCTGTTTCCCCTCCTGAGCATATTGCTGCCGCACACATTGAGACCTTTGCTGTGGCAAGAAATGTGGAGGATGTCCCAGCCGAGAGAATAACTCCCTTGATTCCTGCCCAAGGAGTAGCAAGAAGCACACAGCAGTCCAGGGATAAGTTAACATCTATGATTGCAGATTCTGCTGCCTCTTTTGCTGGAAGTTTGTCAAGATCTTCCGAGATCCTCTATTCTGATTTGCCATCCAACTTCAAGCCCATCATTAAGGCAATTGTAGTCCATCTTGAGGAGACAATCTGTGTCGAAAGGCTTGGAGTCAAAGCATGCTTTGAATTTACCTCAGAGAGTGCTGCCTTCATCAGAAACACTcttttctacaacatgattggaaaGCATTCAGTCCTTATTTCTGTGAAACCATCATCTGAACCCGCCATCGAGAGGCTGGAGTTTGAAGTGCAAGTTGGACCCAAGGCTGCAGAAAAGATTATCAAAGTCATCACCATGAACGAAGAGGAGGAAGCTCCCGAGGGAAAAACTGTACTGTTGAAGCTCAAGAAAATTCTGCTGCCTGATCTGAAGAACGGCACCAGAGCTTCCTCTAGTTCCAGCAGCTCTAGTTCCAGCAGCTCTCGCTCTAGTAGTTCCCGCTCTAGATCCAGAAAATCAGAGAGCAGCAGCTCTTCCAGCTCCTCCAGCTCTCGCATCTCCAAGCGTGACGGCCCCGACCAGCCTTACAACCCCAACGACCGCAAATTCAAAAAGAATCACAAGGACTCTCAATCCACCTCCAATGTCATCTCCAGAAGCAAGAGCAGTGCCTCTAGCTTCCATGCCATCTACAAGCAGGACAAATTCCTTGGCAATAAACTTGCCCCTATGGTGATCATCCTCTTCCGTTTAGTGAGAGCTGACCATAAGATAGAGGGATACCAGGTTACTGCTTACTTGAACAAAGCTACTTCCAGACTGCAGATCATTATGGCTGCCCTTGATGAGAACGACAACTGGAAACTGTGTGCTGATGGTGTTCTGCTCAGCAAACACAAAGTCACTGCCAAGATTGCTTGGGGGGCAGAGTGCAAGGATTATAACACCTTTATCACTGCTGAGACTGGTCTTGTTGGTCCAAGCCCTGCAGTTCGTCTGAGGTTGTCTTGGGACAAACTCCCCAAGGTTCCCAAGGCTGTTTGGCGCTATGTTAGGATCGTGTCTGAATTCATCCCTGGGTACATCCCATATTACCTGGCTGACTTGGTTCCAATGCAAAAAGACAAAAATAATGAGAAACAGATTCAATTCACTGTGGTTGCCACATCTGAAAGGACCCTGGATGTCATTCTGAAAACACCCAAGATGACACTGTATAAACTGGGTGTGAACCTCCCCTGTTCTCTGCCATTTGAGTCTATGACTGATCTTTCTCCCTTTGATGACAACATTGTTAACAAAATCCACTACTTGTTTTCTGAAGTCAACGCAGTTAAATGTAGCATGGTCAGAGACACATTGACAACATTTAACAACAAGAAGTACAAGATCAACATGCCTCTCTCCTGCTACCAAGTTTTGGCTCAGGATTGCACCACAGAGCTCAAATTCATGGTTCTGCTGAAGAAGGATCATGCATCTGAACAAAACCACATCAATGTGAAAATCTCTGACATCGATGTTGACCTGTACACTGAAGACCATGGTGTGATAGTGAAGGTCAATGAAATGGAAATTTCCAACGACAACCTCCCATACAAGGACCCCTCAGGTTCTATCAAGATCGATCGGAAGGGTAAAGGCGTGTCTCTCTATGCCCCAAGCCATGGTCTCCAAGAAGTCTACTTTGATAAGTACTCATGGAAGATTAAAGTTGTGGACTGGATGAAGGGACAGACCTGTGGACTCTGTGGAAAGGCTGATGGCGAAAACAGACAGGAGTACCGTACACCCAGTGGCCGCCTGACCAAGAGCTCAGTCAGCTTTGCCCATTCCTGGGTGCTTCCTTCTGATAGCTGCCGCGATGCGTCTGAATGTCTCATGAAGCTCGAGTCTGTGAAGCTGGAGAAGCAGGTGATTGTTGATGACAGGGAGTCCAAATGCTACTCTGTTGAGCCTGTGCTGCGCTGTCTGCCTGGATGCCTCCCAGTGAGGACCACCCCCATCACCATCGGTTTCCACTGCCTGCCCGTCGATTCCAACCTGAACCGCTCTGAAGGTCTGAGCAGCATCTATGAGAAGAGTGTGGACCTGATGGAGAAGGCAGAAGCCCATGTGGCCTGTCGCTGCTCTGAGCAGTGCATGTAGTGCTGTGGTGGAGCAGATACTGTAACTTTTATAACAGAAAATATGTAATTTCACATCACTGAGATGTAACCTACAACATTATTGACCACTCAAATTGTAATAAATCCAACTGTGCATTCAAA

Function

GO:

id name namespace
GO:0006869 lipid transport biological_process
GO:0045735 nutrient reservoir activity molecular_function
GO:0005319 lipid transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969106.1 False 4999 mRNA 0.49 32 43566590 43576447
XM_036969105.1 True 4052 mRNA 0.48 26 43568063 43576447

Neighbor

gene id symbol gene type direction distance location
LOC110519394 LOC100136747 coding upstream 5065 43551650 ~ 43561525 (+)
LOC110513710 LOC100136747 coding upstream 20019 43536224 ~ 43546571 (+)
zranb2 zranb2 coding upstream 152477 43401184 ~ 43414113 (+)
LOC110521855 rpl36 coding upstream 249144 43303838 ~ 43317446 (+)
LOC110521852 LOC106560595 coding upstream 376838 43183333 ~ 43189752 (+)
LOC110521861 LOC100136747 coding downstream 5079 43581526 ~ 43591268 (+)
LOC110521008 LOC100136747 coding downstream 19864 43596311 ~ 43608691 (+)
LOC110521009 LOC100136747 coding downstream 37984 43614431 ~ 43623301 (+)
LOC110521871 LOC106583949 coding downstream 262073 43838520 ~ 43845724 (+)
LOC118945797 NA coding downstream 329059 43905506 ~ 43910872 (+)
G2238634 NA non-coding upstream 48578 43459123 ~ 43518012 (+)
G2238664 NA non-coding upstream 69880 43496463 ~ 43496710 (+)
G2238147 NA non-coding upstream 203740 43306410 ~ 43362850 (+)
G2238067 NA non-coding upstream 369870 43193643 ~ 43196720 (+)
G2238021 LOC106583956 non-coding upstream 411695 43152399 ~ 43154895 (+)
G2238687 NA non-coding downstream 854 43577301 ~ 43592677 (+)
G2238748 NA non-coding downstream 138820 43715267 ~ 43743741 (+)
G2239203 NA non-coding downstream 428468 44004915 ~ 44005214 (+)
G2239209 NA non-coding downstream 435325 44011772 ~ 44012006 (+)
G2239235 NA non-coding downstream 450930 44027377 ~ 44027711 (+)
G2238623 adgrl4 other upstream 100761 43440853 ~ 43465829 (+)
G2237341 NA other upstream 836139 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1013404 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2180597 41385660 ~ 41385993 (+)
LOC110521828 LOC106584006 other upstream 2445500 41101017 ~ 41158001 (+)
G2238671 LOC100136747 other downstream 32134 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 823438 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 979747 44555495 ~ 44563618 (+)
G2239510 NA other downstream 998409 44574856 ~ 44575278 (+)
G2239933 NA other downstream 1277254 44853478 ~ 44860893 (+)

Expression


Co-expression Network