Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110521011 |
| gene name | LOC106583946 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 44062053 ~ 44100935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036968767.1 | False | 6597 | mRNA | 0.51 | 20 | 44062053 | 44100935 |
| XM_036968768.1 | False | 6588 | mRNA | 0.51 | 20 | 44062053 | 44100935 |
| TU2559946 | True | 2630 | lncRNA | 0.42 | 1 | 44098264 | 44100893 |
44,028,000
44,032,000
44,036,000
44,040,000
44,044,000
44,048,000
44,052,000
44,056,000
44,060,000
44,064,000
44,068,000
44,072,000
44,076,000
44,080,000
44,084,000
44,088,000
44,092,000
44,096,000
44,100,000
44,104,000
44,108,000
44,112,000
NC_050570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945797 | NA | coding | upstream | 151181 | 43905506 ~ 43910872 (+) |
| LOC110521871 | LOC106583949 | coding | upstream | 216329 | 43838520 ~ 43845724 (+) |
| LOC110521009 | LOC100136747 | coding | upstream | 438752 | 43614431 ~ 43623301 (+) |
| LOC110521008 | LOC100136747 | coding | upstream | 453362 | 43596311 ~ 43608691 (+) |
| LOC110521861 | LOC100136747 | coding | upstream | 470785 | 43581526 ~ 43591268 (+) |
| LOC110521874 | LOC106583945 | coding | downstream | 12832 | 44113767 ~ 44124283 (+) |
| LOC110521876 | LOC106583944 | coding | downstream | 23472 | 44124407 ~ 44145448 (+) |
| LOC110521877 | LOC106583943 | coding | downstream | 45110 | 44146045 ~ 44162689 (+) |
| LOC110521878 | mvp | coding | downstream | 68995 | 44169930 ~ 44196336 (+) |
| LOC110521879 | LOC106600749 | coding | downstream | 96442 | 44197377 ~ 44206470 (+) |
| G2239280 | NA | non-coding | upstream | 2238 | 44059590 ~ 44059815 (+) |
| G2239277 | NA | non-coding | upstream | 3384 | 44058396 ~ 44058669 (+) |
| G2239274 | NA | non-coding | upstream | 6353 | 44055262 ~ 44055700 (+) |
| G2239247 | NA | non-coding | upstream | 28956 | 44032837 ~ 44033097 (+) |
| G2239235 | NA | non-coding | upstream | 34342 | 44027377 ~ 44027711 (+) |
| G2239312 | NA | non-coding | downstream | 6174 | 44107109 ~ 44107394 (+) |
| G2239314 | NA | non-coding | downstream | 8471 | 44109406 ~ 44109822 (+) |
| G2239346 | NA | non-coding | downstream | 112541 | 44213476 ~ 44213805 (+) |
| G2239347 | NA | non-coding | downstream | 113937 | 44214872 ~ 44215154 (+) |
| G2239350 | NA | non-coding | downstream | 118531 | 44219466 ~ 44219671 (+) |
| G2238671 | LOC100136747 | other | upstream | 438750 | 43608581 ~ 43623303 (+) |
| G2238623 | adgrl4 | other | upstream | 596224 | 43440853 ~ 43465829 (+) |
| G2237341 | NA | other | upstream | 1331602 | 42729852 ~ 42730451 (+) |
| LOC110521840 | LOC106583968 | other | upstream | 1508867 | 42548328 ~ 42554269 (+) |
| G2236045 | NA | other | upstream | 2676060 | 41385660 ~ 41385993 (+) |
| G2239435 | LOC106583900 | other | downstream | 298950 | 44399885 ~ 44427686 (+) |
| LOC110521895 | LOC103040367 | other | downstream | 455259 | 44555495 ~ 44563618 (+) |
| G2239510 | NA | other | downstream | 473921 | 44574856 ~ 44575278 (+) |
| G2239933 | NA | other | downstream | 752766 | 44853478 ~ 44860893 (+) |
| G2240165 | NA | other | downstream | 863835 | 44964770 ~ 44965537 (+) |
