lat


Basic Information

Item Value
gene id lat
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44290436 ~ 44293436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969216.1
CATTGGGGGAGGTTGAGATGACGGCAGGGTAGGAGAGTTGatgagaagagggaggaagggaagtagGAGGCGACTGAACAGGCCGTACAGACAGAAAGGCGCATCGAGGAAGACACCTATGTCAAGCTGCAATAGTCAAGGTTCCTTACAGTTAACTGACAGAGTGGAAAACACAGAGTGTTAAATAGGGAGAGTGGTATGACAGGGATTTGAGCAACAGAGGTATGGTATACTGTAGATCAGATGGATCCAAAATGACGCATCTCAGTGTAGCTGACGACTGAGCTGGTCTGGGGATTGGATTGGGATCAACTCGGCCTGAACTCGACCTCCGGTTTAGAACCAGTCTCATTGACCACCTGGCAGATCATCAGCGACCTACGACCTAACGCTCTGTTGGGAATCTACACAAATCGTGCCGACAGCGATGGAGGTGTCTATGCAGCTGTATGTGTTGCTGCTGAGTGGAGCGGTCCTCCTGTCACTCATCCTGTTGACTGGCCTGTGTCTTCGCTGCAGAAGACACAACCTGCCTACGTCCATTCAGCAGCGTTACAGTGAGGATTACACTCAGCACACCCCAGGATTCGGCTTGGCCCACCCAccatACAACCCCTCTTCATCCACAAGCTGGGGTGCTCCCCCTTCCAGCCTCCTTTCACCCATTTCACCACAGATCGTTCTGAGACCGAACTCTGTCACCCCAACTGAAAATGGTGAGATGTCTCGCTCTTCCTCTACATCAAATGTGTATTTTCTCCACTTGTTTTCCTTCTTTCGCCACTATCTCTATAACGTCACAGTTCAGTTCCTTCTTAATGGTTAGCTTTTTCTTGCAGAGAGTAATGACGGCTATGAGAGTCCAGGAGAAGGTAATGTGAGCGTTATATCCTACCATGTTCAATAACACTGATCCCCTCAAACATATGTACACAGTAACTGCTGAAGAAGTTTAGACAATGTGCACATGGCTCCTTAGGTGaaacaaaatatgtttttattgtcACACACCAattaggtgcagtgaaatgtattATTTTACATGGTCAACCATATGGCACCCCTGGAGCTAGGgttaaagtgccttgctcaagggcacaacaacACATTTTTCACCTCGTTGGCTTGGATGTTTGAACCagcaatgctctaaccgctaggctactgtACCTGCCTACTTGTGACTTACTCACATTCATTCAGACATTTGGACATTAAACCATTCATGcaatgcctttggaaagtattcggaccccttgactttttccacattttgttagt

Function

NR:

description
uncharacterized protein LOC110521887 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969216.1 True 1281 mRNA 0.47 6 44290436 44293436

Neighbor

gene id symbol gene type direction distance location
LOC110521885 LOC106583937 coding upstream 1161 44272549 ~ 44289275 (+)
LOC110521884 sgf29 coding upstream 21230 44261145 ~ 44269206 (+)
LOC110521882 LOC106584009 coding upstream 42083 44246842 ~ 44248418 (+)
LOC110521881 LOC106583940 coding upstream 55503 44231559 ~ 44234933 (+)
LOC110521880 LOC106583941 coding upstream 59121 44221395 ~ 44231315 (+)
LOC110521889 rabep2 coding downstream 127086 44420522 ~ 44431709 (+)
LOC110521892 mk03 coding downstream 222655 44516091 ~ 44531384 (+)
LOC110521893 LOC106583904 coding downstream 238983 44532419 ~ 44553025 (+)
LOC110521895 LOC103040367 coding downstream 262059 44555495 ~ 44563618 (+)
LOC110521896 LOC106583906 coding downstream 301585 44595021 ~ 44614287 (+)
G2239354 NA non-coding upstream 18376 44271469 ~ 44272060 (+)
G2239372 NA non-coding upstream 34479 44253441 ~ 44255957 (+)
G2239367 NA non-coding upstream 45604 44244599 ~ 44244832 (+)
G2239365 NA non-coding upstream 46910 44243317 ~ 44243526 (+)
G2239409 NA non-coding downstream 55469 44348905 ~ 44350220 (+)
G2239414 NA non-coding downstream 79609 44373045 ~ 44374669 (+)
G2239416 NA non-coding downstream 83572 44377008 ~ 44378792 (+)
G2239472 NA non-coding downstream 179773 44473209 ~ 44473482 (+)
G2238671 LOC100136747 other upstream 667133 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 824607 43440853 ~ 43465829 (+)
G2237341 NA other upstream 1559985 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1737250 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2904443 41385660 ~ 41385993 (+)
G2239435 LOC106583900 other downstream 106449 44399885 ~ 44427686 (+)
G2239510 NA other downstream 281420 44574856 ~ 44575278 (+)
G2239933 NA other downstream 560265 44853478 ~ 44860893 (+)
G2240165 NA other downstream 671334 44964770 ~ 44965537 (+)

Expression


Co-expression Network