LOC110521922 (hn1l)


Basic Information

Item Value
gene id LOC110521922
gene name hn1l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45447550 ~ 45461566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599892.2
CTTCCCATTGCTGGCTCGTCCTATCGAGTGGGCGGGGCTTTTCCCGGTTTCGGAAGGGCAACACGCAACCAAGCAACAAAACTTTTTAAAAGATTGAGCTAGCTACGACATTAATTTCCTCTCTCACGAAGACAGTCTTCACAATGACTTCGACGAACATGTTTTCAGGACTCGATAATGGCGCAAAGCCAAGTTCAAGAGTCCTGCGTCCCCCCGGAGGTGTCTCCAGCGACCTGTTCGGTGGCTATGAGGGAGAAGCAGCTGCTTCGAGGCGGCCCCACAAGATGGCCTCCAACCTTTTCGCCCCACCAGAGCCCCAGGGTGTCATCAGGCGAACCAACCCCCCAGGGGGTAAAAGCAGTGGGATATTTGGTTCTCCAGATGCCCCAGCCGAGCAACGGAGACCCGTACCCCCAGGCGGTAACACCAGCAACATCATCTGGGGGCTAGAGAGCGCCCCACCCTCTGACAAAGCCCATTCCAACAAGCCAAAGGACAACATTTCTGTGGGTGAAAGTCCCATGCCCATACCTGAGCCCCCAGCTCCTCTTCCGAAGGAGAGCCCGGCcaaggaggtgaaggaagagaaCGTTGCCTCCCCTCCCCCCACTCCCACCAAAGCAGCGGTGGAGACTGCGCCTTCTCCCTCAGCCAAGAAGCCAGAGGCCTGCCTTAGTGAGCTCTCACTGAAGGACCACGAGCCCCACCTCGGCCCCCGCCCCCGCTCCCATAACAAGGTCCTTAACCCCCCAGGAGGGAAGTCTAGTGTGGTGTTCTACTGAGCCAGCTCCTCCATCCCATTTCTATTCAattatgcatcccaaatggcaccttattcccaatATAAGTAAGTAACCCTTGTCCGAGCCAGAACGGCACGTAGGGCAGGAGCCCATCTcttgtttctgtagcgtgaggctgcttgatgtacaagtacaccccctggacaggacaagTTTATGGTCCCTGGATAAAATTAGTGGACTGTATAGGAaacagggagccatttgggatccaAACCATGCACACCACTATTCTCTGTTCTGTTCATTTTCCCTTTTCACTCTGTCCTTCCATGTCTTGCACTTTCTAACCTAACCCATTCTTGACCTAACCTCCCCCTGTTCTTTTTAGATTATGTTGCTATCAAGCAGGAAGAAAATAATCTATCATTTTTACAGGCTAAATTCCTGTCCAATCATTCAAAATTCCCGATTCATTGCAAAGGTTCTATTTCTTGCtgtaaatgttattttttgtattacatggttttaaatgttattGTGTTGATTACAAAGGTTAATTTAGTCAATCACTGGCATCTATTTGTAATTCCGAGTATGACTCAGCAGTGTATCTTTGTCGGCATTGAGATCTGTTTGTTGCCCATGCAAACGGTTGTCATAGTAAGCCCTTAAGTGATCAAAATCCCTCTTTACTCTGTTTGTTAACAGTAACAGGTATCCCTATCATGCTCATTCTGTTTTCCATTTCATCAcactccttttctctccactaaTAATCAAACCTATCTTGAGTTTCTCTCTCTGCAGCCAGAAACAAACTCCTGTTCAGGGAAAAAAAAGCAAAAAATCGACTAACTAATGAATGCAAAGCAAAGAGCTATGGGCAGTACCCATGATGCACTGCCCACCCCCCAAAGTTCTTGTTCTGTGGAAGAAATTCCAATATGATTTTATATCTCCCATGCAAATGGCTGAATGTGTTGTGGTTGTTCCCTGCTCTGTTACCATTGCTTGCTGTTATCAGAGGTTTGTATCCACTCGGGGAGGCCTCTGTTTTAAATTAAAACGTCTGCTGTACACAATTGAACTCTGGAATAGTAAATGACTGGTCAAAATACGGATGGGGACTTGGGAGACCCTAAGGAACCCCTAGCCACCCATACACCGCGTTCCAGGCTGCCTGTCGTGCACCAATTCTTACAACGCCTGGCGAAGCGTTTTAGCATGTCAGTAACCAGTATGGCTAGTTTCTCATCACCGTATAAACCTTTTAAGACTTTGGTGTAAATCTGAGGTCAGCATATATTAAAGGTGCGTGATGACTTAGTGCAAATAAACATTTATGTTGCCATTAAATTAACCAAAACTGGCCGGTTTGTAGGCAGTCTGGAACGCACCCCGGTTCAAGGTTTCCTGGTGCCATCTTAACCCCTGAGTGTTGGAGTACAGGCAGGCAAAGTTCACAGCAGAGGAAAAGCAAAAATAACCTGTGTTGCAATAAAACTTATTTTCAGACTATCA

Function

NR:

description
hematological and neurological expressed 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599892.2 True 2267 mRNA 0.47 5 45447550 45461566

Neighbor

gene id symbol gene type direction distance location
LOC110521920 LOC106583926 coding upstream 64670 45368696 ~ 45382880 (+)
LOC110521919 NA coding upstream 82262 45357852 ~ 45365288 (+)
LOC110521918 LOC106583924 coding upstream 139720 45305514 ~ 45307830 (+)
LOC110521917 LOC106583923 coding upstream 276846 45150366 ~ 45170704 (+)
LOC118945915 NA coding upstream 289942 45157530 ~ 45157608 (+)
LOC110521924 mapk8ip3 coding downstream 18968 45480534 ~ 45557435 (+)
LOC110521928 LOC106583890 coding downstream 382893 45844459 ~ 45862555 (+)
LOC110521931 LOC106600938 coding downstream 466713 45928279 ~ 45933944 (+)
LOC110521932 LOC106583880 coding downstream 473677 45935243 ~ 45980319 (+)
LOC110521019 tr-alpha coding downstream 601317 46062883 ~ 46088097 (+)
G2240631 NA non-coding upstream 49100 45397303 ~ 45398450 (+)
G2240607 NA non-coding upstream 108951 45338351 ~ 45338599 (+)
G2240605 NA non-coding upstream 109363 45337972 ~ 45338187 (+)
G2240599 NA non-coding upstream 111114 45336068 ~ 45336436 (+)
G2240662 NA non-coding downstream 1740 45463306 ~ 45463912 (+)
G2240669 NA non-coding downstream 2737 45464303 ~ 45464561 (+)
G2240671 NA non-coding downstream 3564 45465130 ~ 45465369 (+)
G2240676 NA non-coding downstream 9726 45471292 ~ 45471598 (+)
G2240680 NA non-coding downstream 13644 45475210 ~ 45475410 (+)
G2240221 LOC106583920 other upstream 321840 45058017 ~ 45125710 (+)
G2240165 NA other upstream 482013 44964770 ~ 44965537 (+)
G2239933 NA other upstream 587214 44853478 ~ 44860893 (+)
G2239510 NA other upstream 872272 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 883932 44555495 ~ 44563618 (+)
LOC110521020 LOC107658484 other downstream 699638 46161172 ~ 46190655 (+)

Expression


Co-expression Network