G2190080


Basic Information

Item Value
gene id G2190080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 170888 ~ 181982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2504821
ctactcgtcagctaggttgtgccagctactcatcagctactcgtcagctaggttgtttgtcaactgctcgtcagctaggttttgtGTCAGATGCTTGTCAcataggttgtgtgtcagcaacTAGTCAGGTAGgttttgtgtcagctactcgtcaaatgctcgtcagctaggttgtgtgacAGCTGCTCGTAAGCTAGGTAGTGTGTCAGCGTCTAATCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2504821 True 221 lncRNA 0.49 2 170888 181982

Neighbor

gene id symbol gene type direction distance location
trnat-ugu-41 NA coding upstream 91914 78903 ~ 78974 (+)
cfap161 LOC106584861 coding downstream 181461 363443 ~ 384257 (+)
bnip2 bnip2 coding downstream 303890 485872 ~ 557208 (+)
LOC110521136 NA coding downstream 426584 608566 ~ 616624 (+)
tbc1d2b tbc1d2b coding downstream 512956 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 607856 789838 ~ 835444 (+)
G2190079 NA non-coding upstream 17765 150510 ~ 153123 (+)
G2190077 NA non-coding upstream 22912 143790 ~ 147976 (+)
G2190074 NA non-coding upstream 54469 112657 ~ 116419 (+)
G2190050 NA non-coding downstream 179834 360931 ~ 362627 (+)
G2190199 NA non-coding downstream 352839 523534 ~ 542502 (+)
G2190209 NA non-coding downstream 376313 558295 ~ 558851 (+)
G2190210 LOC106584847 non-coding downstream 382492 564474 ~ 571140 (+)
G2190213 NA non-coding downstream 394208 576190 ~ 576618 (+)
G2190529 NA other downstream 700958 882940 ~ 884097 (+)
G2190881 NA other downstream 1069684 1251666 ~ 1252951 (+)

Expression


Co-expression Network