G2190050


Basic Information

Item Value
gene id G2190050
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 360931 ~ 362627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2504769
gcagaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagacatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagattaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccctccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacagagatttgtcttccaacaagacaatgatccaaaacataaagtaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtagtcGTAGCAACTTAAGGGTAACTTAAGGTAACTTAAggtaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatggttgtgtcccacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttgatgcctgaaatgtggcaaaaggtcacaaagttcaagggggctgaatactttcgcaaggcactgtatattatatcactcaaatatccaattaatggtGGTCAATATTGAGAGATATCGTGAGGCTACCCTGACGTAGCTGAAATtacatgatcaattgatgtttaATGATCATTAAAAACATGCAGAtacttgctgtataactctgatagAGCTAAATGTGCTAAATTGTTTTGCATGGAATAGTCTGAAATGTGTAGATCTGACTATGCTCTTCAAGAGGTGATGATATTACAACCAAATAGTTAACATTCAAATAACAATCCCTTGCAAACGGCACgcagttgtcaatggttttagtgGACCTTGCTCCCTCAGCAGGCAAATCGAACGCTCTGCACCTTATTGAGACATTTTGTTGATAACGACCTTTAAGGCCTCAGACTGAGAATGTCCCAGTGTTCTAACTCTCTCAGCCAATAAGAAGACACTGCTGCCGCTCACACTGTATTGTTACTGCCAGACGAAACTGGACCAAACCGGGCTGAACTGGACCAGACCAAACAAGACCACACCAGACAGAGCCAGCTCCCCTCCCCCAGAAGACACAGGGCCaatctaaaatggcaccctattccctatcaggCTCTGGCCAAAATAACTACACTatataggggaatagggtgccatctacTCCCAGTAGACCCTCTATTTAGTATTTAGATCAACAGTAATAACAGAGCTATGCTTGTagatttattatattacaactgTGACATTTTGATAATATGAAAATCATTACTTTTGTTCATAAGAAAAAaatctattaaaaaaaaaacattt
>TU2504768
agttcaagggggctgaatactttcgcaaggcactgtatattatatcactcaaatatccaattaatggtGGTCAATATTGAGAGATATCGTGAGGCTACCCTGACGTAGCTGAAATtacatgatcaattgatgtttaATGATCATTAAAAACATGCAGAtacttgctgtataactctgatagAGCTAAATGTGCTAAATTGTTTTGCATGGAATAGTCTGAAATGTGTAGATCTGACTATGCTCTTCAAGAGGTGATGATATTACAACCAAATAGTTAACATTCAAATAACAATCCCTTGCAAACGGCACgcagttgtcaatggttttagtgGACCTTGCTCCCTCAGCAGGCAAATCGAACGCTCTGCACCTTATTGAGACATTTTGTTGATAACGACCTTTAAGGCCTCAGACTGAGAATGTCCCAGTGTTCTAACTCTCTCAGCCAATAAGAAGACACTGCTGCCGCTCACACTGTATTGTTACTGCCAGACGAAACTGGACCAAACCGGGCTGAACTGGACCAGACCAAACAAGACCACACCAGACAGAGCCAGCTCCCCTCCCCCAGAAGACACAGGGCCaatctaaaatggcaccctattccctatcaggCTCTGGCCAAAATAACTACACTatataggggaatagggtgccatctacTCCCAGTAGACCCTCTATTTAGTATTTAGATCAACAGTAATAACAGAGCTATGCTTGTagatttattatattacaactgTGACATTTTGATAATATGAAAATCATTACTTTTGTTCATAAGAAAAAaatctattaaaaaaaaaacattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2504769 False 1697 TUCP 0.40 1 360931 362627
TU2504768 True 812 lncRNA 0.40 1 361816 362627

Neighbor

gene id symbol gene type direction distance location
LOC110522685 LOC105029374 coding upstream 2554 89318 ~ 359262 (+)
trnat-ugu-41 NA coding upstream 282842 78903 ~ 78974 (+)
cfap161 LOC106584861 coding downstream 816 363443 ~ 384257 (+)
bnip2 bnip2 coding downstream 123245 485872 ~ 557208 (+)
LOC110521136 NA coding downstream 245939 608566 ~ 616624 (+)
tbc1d2b tbc1d2b coding downstream 332311 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 427211 789838 ~ 835444 (+)
G2190080 NA non-coding upstream 179834 170888 ~ 181982 (+)
G2190079 NA non-coding upstream 208693 150510 ~ 153123 (+)
G2190077 NA non-coding upstream 213840 143790 ~ 147976 (+)
G2190074 NA non-coding upstream 245397 112657 ~ 116419 (+)
G2190199 NA non-coding downstream 172194 523534 ~ 542502 (+)
G2190209 NA non-coding downstream 195668 558295 ~ 558851 (+)
G2190210 LOC106584847 non-coding downstream 201847 564474 ~ 571140 (+)
G2190213 NA non-coding downstream 213563 576190 ~ 576618 (+)
G2190413 NA non-coding downstream 222831 585458 ~ 585668 (+)
G2190529 NA other downstream 520313 882940 ~ 884097 (+)
G2190881 NA other downstream 889039 1251666 ~ 1252951 (+)
G2191047 NA other downstream 1318927 1681554 ~ 1682049 (+)

Expression


Co-expression Network