G2190209


Basic Information

Item Value
gene id G2190209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 558295 ~ 558851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2504965
agcctattgaacctagacttggtgctccggtaccgcttgccgtgcggtagcacagagaacagtctatgactagggtggctggagtctttgacaatttttatggtcttcctctgacaccacctggtatagatgtcctggatggcaggaagcttggccccagtgatgtactgggccgtacgcactaccctctgtagtgccttgcggtcggaggccgagcagttgtcatagcAGGTAGTGGtgcagaggaaggccctaaaaatcatGAAAGACTCCAGGCACACTAGTCATATATACACATAGGGTTTGTCATTCCCTCATACACCAAGTATGTATATATAATGTTATAAAACTTTATAGCCTGGCATTGTTgactacatgtagaacagtaatAACGATGGTATAACTGTTACAGAATTGATGTGTTCAGTGAAACTAGTCATTGGACTAGATGCAGTACTAATTAAAGACTACAGGAGGGTGTATGTCTGGAATATTCATAGCAATCACAACGATACAGTGCAACCCCAACATCTAAGAAAAACTACATTTTATTTACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2504965 True 557 lncRNA 0.44 1 558295 558851

Neighbor

gene id symbol gene type direction distance location
bnip2 bnip2 coding upstream 1087 485872 ~ 557208 (+)
cfap161 LOC106584861 coding upstream 174038 363443 ~ 384257 (+)
LOC110522685 LOC105029374 coding upstream 199033 89318 ~ 359262 (+)
trnat-ugu-41 NA coding upstream 479321 78903 ~ 78974 (+)
LOC110521136 NA coding downstream 49715 608566 ~ 616624 (+)
tbc1d2b tbc1d2b coding downstream 136087 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 230987 789838 ~ 835444 (+)
ca12 LOC106584842 coding downstream 449898 1008749 ~ 1028587 (+)
man2c1 man2c1 coding downstream 517103 1075954 ~ 1136244 (+)
G2190199 NA non-coding upstream 15793 523534 ~ 542502 (+)
G2190050 NA non-coding upstream 195668 360931 ~ 362627 (+)
G2190080 NA non-coding upstream 376313 170888 ~ 181982 (+)
G2190079 NA non-coding upstream 405172 150510 ~ 153123 (+)
G2190077 NA non-coding upstream 410319 143790 ~ 147976 (+)
G2190210 LOC106584847 non-coding downstream 5623 564474 ~ 571140 (+)
G2190213 NA non-coding downstream 17339 576190 ~ 576618 (+)
G2190413 NA non-coding downstream 26607 585458 ~ 585668 (+)
G2190408 NA non-coding downstream 47675 606526 ~ 606790 (+)
G2190529 NA other downstream 324089 882940 ~ 884097 (+)
G2190881 NA other downstream 692815 1251666 ~ 1252951 (+)
G2191047 NA other downstream 1122703 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1688213 2247064 ~ 2247502 (+)

Expression


Co-expression Network