G2190408


Basic Information

Item Value
gene id G2190408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 606526 ~ 606790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505247
ctgttaaggcaagggctgatttcaaggttttactgctaacctacaaagcattacatgggcttgctcctacctatctttccgatttggtcctgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagttggaggcagggctttctcctatagagctccatttttatggaatggtctgcctacccatgtgagagacgcagactcggtctcaacctttaagtcttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505247 True 265 lncRNA 0.47 1 606526 606790

Neighbor

gene id symbol gene type direction distance location
bnip2 bnip2 coding upstream 49318 485872 ~ 557208 (+)
cfap161 LOC106584861 coding upstream 222269 363443 ~ 384257 (+)
LOC110522685 LOC105029374 coding upstream 247264 89318 ~ 359262 (+)
trnat-ugu-41 NA coding upstream 527552 78903 ~ 78974 (+)
LOC110521136 NA coding downstream 1776 608566 ~ 616624 (+)
tbc1d2b tbc1d2b coding downstream 88148 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 183048 789838 ~ 835444 (+)
ca12 LOC106584842 coding downstream 401959 1008749 ~ 1028587 (+)
man2c1 man2c1 coding downstream 469164 1075954 ~ 1136244 (+)
G2190413 NA non-coding upstream 20858 585458 ~ 585668 (+)
G2190213 NA non-coding upstream 29908 576190 ~ 576618 (+)
G2190210 LOC106584847 non-coding upstream 35386 564474 ~ 571140 (+)
G2190209 NA non-coding upstream 47675 558295 ~ 558851 (+)
G2190199 NA non-coding upstream 64024 523534 ~ 542502 (+)
G2190422 NA non-coding downstream 26905 633695 ~ 633963 (+)
G2190407 NA non-coding downstream 28182 634972 ~ 637347 (+)
G2190424 lrrc61 non-coding downstream 40710 647500 ~ 651492 (+)
G2190426 NA non-coding downstream 43148 649938 ~ 650467 (+)
G2190050 NA other upstream 243899 360931 ~ 362627 (+)
G2190529 NA other downstream 276150 882940 ~ 884097 (+)
G2190881 NA other downstream 644876 1251666 ~ 1252951 (+)
G2191047 NA other downstream 1074764 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1640274 2247064 ~ 2247502 (+)

Expression


Co-expression Network