G2190407


Basic Information

Item Value
gene id G2190407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 634972 ~ 637347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505246
CCGCCTGTTTATTAGTCATTTTAATGCCAGATAGTTAGTATTTTCCATGTACTGCTAGCGTTGGCCTTATTAACGGTATCAAAACAAGTAGAAACAACTCAAACTGTGCAGAATTAATTCACGACATAAGCATCACTCCCAATACCAGCATAATAAAACAAACACTTCACCATCAAtgatgaagtagtgcactatggaaaAGCTTTGATAATGTGGCTAGTTTTAAACAATAGTAACAACTTACTAAGTTGTATTGTAATAGCAGCATGGCTCAGCATCACCAACACACAGCACTGTGCATAGTGAGCACAGTAAACACCTTATGGCACCTAAGTGGTGTCAATATGGATCCACGTCTGCACCCAAAGTCTTACGTCAGGTGGCGTCACTCCTACGCAATGGTCGTCCCTCAACCGACAATAAGGGGAATCATCACGTTATCAGTTGTAAGACAATGGGTCTGAACCCACAGAGTTGGTTGGAACTGGAGCCTGTAGGCTACTTAGCACTCAGGAGGGTAGAAGTCTGTTGAGTGTAGAAGTCTGTAGAGGGTAGACGTCTGTAGAGGGTAGACGTCTGTAGAGGGTAGAAGTCTGTAggcataaaaaaaatataatatatattttttttacctgtttatttctccccaatttcgtggtttccAATTGGTAGGTAgttttgtcccatcgctgcaactcccatatggagaggcgaaggttgagagttGTGCGTCCCACGAAACACGAcccagccacactgcttcttgacacaacgcccacttaacccggaagccagccgcaccaatgttctgtatacaccgtacacctggcagcCGTGTCAGGGGccatgtgcccggcccgccacaggagtaaCTAGAGCGCGATGGTAAATGTTAATCTTGGCCTGTCAAATCCTctcctaacccagatgacgctgggccaattgtgtgccgcctcatgggtctcccaggaactggccagctgtgacacagcctgggatcgaacccaggtctctAGTGACGCCTCAAAGACTGCGATgaagtaccttagaccgctgcaccacttgagAGGCCCCCGCAAATTGATCTCCTCCATTGAATTTCAAAATCCCGATGTGGCCCTCGAGCCAAAAAGTTTGCCCACCCCTGCTATAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGTGGGTAGGAGTCGGCAGTGGGTAGGAGTCGGTAGTGGGTAGGAGTCGGTAGTGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGTGGGTAGGAGTCGGTAGAGGGTAGGAGTCGGTAGTACTAGCCTGTACGATCTGTAGGCTACACAGGTAGGTAAACTCTTAGAAAAAACTGTTCCAAAAaagtccccataggagaaccctttttggttccaggtaaaaccttctgtggaaagggtaccacatggaaccaaaaagggttctcctatgggaacagccgaagaacccttttcggttgtagatagcacctttttttctaagagtgtagtataGGCTACACTATACTCAAGGGGATAGGAGGCGTTTCATTGGCTACACTAGACTAGACCCAAGGGGATAGGAGGCTTTACATTGGCTACACTAGACTAGACTCAAGGGGGTAGGAGGCTTTTCATTGGCTACACTAGACCCAAGGGGGTAGGAGGCTTTTCATTGGCTACACTAGATTAGACTCAAGGGGGTAGGAGGCTTTTCATTGGCTACACTAGACCCAAGGGGGTAGGAGGCTTTACATTGGCTACACTAGACCCAAGGGGGTAGGAGGCTTTTCATTGGCTACACTAGACCCAAGGGGGTAGGAGGCTTTACATTGGCTACACTAGACCCAAGGGGGTAGGAGGCTTTTCATTGGCTACACTAGACCCAAGGGTAGTTATGTATCCTCTAGGTGTCACTATGCAGCACTGTCTGCAACGTAATGCTGAGCATGTCAAGGTTCTGGCACTGGTGCTGGGTCAAGCATTCGGATATAAAACAACATCATTTAATACAAATACAtgaagccatgacatcgtttCATGTAAGTAACAcatatcacacaaacacacttcacAATCAATGTTGCCTGTTGTAAACGGCATTTTAAACAGAGTACTGCTTTGGCTGGTTCTTGAGGCTCAGAgatctctctgtctgtgagaTGACATGTGTTGCTCTGTTGTTCAGCAGTCTGCATTCA

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505246 True 2290 lncRNA 0.48 2 634972 637347

Neighbor

gene id symbol gene type direction distance location
LOC110521136 NA coding upstream 24705 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 77764 485872 ~ 557208 (+)
cfap161 LOC106584861 coding upstream 250715 363443 ~ 384257 (+)
LOC110522685 LOC105029374 coding upstream 275710 89318 ~ 359262 (+)
trnat-ugu-41 NA coding upstream 555998 78903 ~ 78974 (+)
tbc1d2b tbc1d2b coding downstream 57591 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 152491 789838 ~ 835444 (+)
ca12 LOC106584842 coding downstream 371402 1008749 ~ 1028587 (+)
man2c1 man2c1 coding downstream 438607 1075954 ~ 1136244 (+)
sema7a LOC106584837 coding downstream 530644 1167991 ~ 1240748 (+)
G2190422 NA non-coding upstream 1009 633695 ~ 633963 (+)
G2190408 NA non-coding upstream 28182 606526 ~ 606790 (+)
G2190413 NA non-coding upstream 49304 585458 ~ 585668 (+)
G2190213 NA non-coding upstream 58354 576190 ~ 576618 (+)
G2190424 lrrc61 non-coding downstream 10153 647500 ~ 651492 (+)
G2190426 NA non-coding downstream 12591 649938 ~ 650467 (+)
G2190438 NA non-coding downstream 28170 665517 ~ 665828 (+)
G2190441 NA non-coding downstream 30644 667991 ~ 669023 (+)
G2190449 NA non-coding downstream 50329 687676 ~ 688188 (+)
G2190199 NA other upstream 107506 523534 ~ 542502 (+)
G2190050 NA other upstream 272345 360931 ~ 362627 (+)
G2190529 NA other downstream 245593 882940 ~ 884097 (+)
G2190881 NA other downstream 614319 1251666 ~ 1252951 (+)
G2191047 NA other downstream 1044207 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1609717 2247064 ~ 2247502 (+)
G2191994 NA other downstream 2122913 2760260 ~ 2762972 (+)

Expression


Co-expression Network