G2190424 (lrrc61)


Basic Information

Item Value
gene id G2190424
gene name lrrc61
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 647500 ~ 651492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505266
tcTAAATGTAATGGAAAGACTCACCTGGGTTGGTGTAATTATAGGTGTTGTCTTTCAGGCGAATATTCTCCAGCTTCCTCAAAGACTGAAGGCAGTGGATGTTGTCAATACTGGATATGAGGTTCCCAGCCACATTTAGGCTCTGTAAACTGTCACAGCAGGAAATGTCTTCTAAGTTAGAGATCCTGTTGGCTGACACATTGAGTATCTGTAGTAGTCTCAGAGAAGAGAGTGGAGCCAGGTTAGTGATGTTGTTACCAGACAGATCCAGTCTCTCCAGATTTATACAGTCCCCGATACAGCCTAGATCATAGATCCCTGGAGAACAGAAAATCATAGGACACGCCCTCTTATTACAAAACTTTCACAATCAGCTTATTCTGGA

Function

symbol description
lrrc61 Orthologous to human LRRC61 (leucine rich repeat containing 61).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505266 True 385 lncRNA 0.43 3 647500 651492

Neighbor

gene id symbol gene type direction distance location
LOC110521136 NA coding upstream 37233 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 90292 485872 ~ 557208 (+)
cfap161 LOC106584861 coding upstream 263243 363443 ~ 384257 (+)
LOC110522685 LOC105029374 coding upstream 288238 89318 ~ 359262 (+)
trnat-ugu-41 NA coding upstream 568526 78903 ~ 78974 (+)
tbc1d2b tbc1d2b coding downstream 43446 694938 ~ 782481 (+)
dapk2b dapk2 coding downstream 138346 789838 ~ 835444 (+)
ca12 LOC106584842 coding downstream 357257 1008749 ~ 1028587 (+)
man2c1 man2c1 coding downstream 424462 1075954 ~ 1136244 (+)
sema7a LOC106584837 coding downstream 516499 1167991 ~ 1240748 (+)
G2190407 NA non-coding upstream 10153 634972 ~ 637347 (+)
G2190422 NA non-coding upstream 13537 633695 ~ 633963 (+)
G2190408 NA non-coding upstream 40710 606526 ~ 606790 (+)
G2190413 NA non-coding upstream 61832 585458 ~ 585668 (+)
G2190438 NA non-coding downstream 14025 665517 ~ 665828 (+)
G2190441 NA non-coding downstream 16499 667991 ~ 669023 (+)
G2190449 NA non-coding downstream 36184 687676 ~ 688188 (+)
G2190450 NA non-coding downstream 37943 689435 ~ 689659 (+)
G2190452 NA non-coding downstream 38657 690149 ~ 690678 (+)
G2190199 NA other upstream 120034 523534 ~ 542502 (+)
G2190050 NA other upstream 284873 360931 ~ 362627 (+)
G2190529 NA other downstream 231448 882940 ~ 884097 (+)
G2190881 NA other downstream 600174 1251666 ~ 1252951 (+)
G2191047 NA other downstream 1030062 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1595572 2247064 ~ 2247502 (+)
G2191994 NA other downstream 2108768 2760260 ~ 2762972 (+)

Expression


Co-expression Network