Gene
RNA
| Item | Value |
|---|---|
| gene id | G2190449 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 687676 ~ 688188 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2505294 | False | 289 | lncRNA | 0.52 | 3 | 687676 | 688188 |
| TU2505295 | False | 225 | lncRNA | 0.52 | 3 | 687676 | 688188 |
| TU2505296 | False | 289 | lncRNA | 0.52 | 2 | 687676 | 688188 |
| TU2505298 | True | 257 | lncRNA | 0.53 | 3 | 687676 | 688188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521136 | NA | coding | upstream | 77409 | 608566 ~ 616624 (+) |
| bnip2 | bnip2 | coding | upstream | 130468 | 485872 ~ 557208 (+) |
| cfap161 | LOC106584861 | coding | upstream | 303419 | 363443 ~ 384257 (+) |
| LOC110522685 | LOC105029374 | coding | upstream | 328414 | 89318 ~ 359262 (+) |
| trnat-ugu-41 | NA | coding | upstream | 608702 | 78903 ~ 78974 (+) |
| tbc1d2b | tbc1d2b | coding | downstream | 6750 | 694938 ~ 782481 (+) |
| dapk2b | dapk2 | coding | downstream | 101650 | 789838 ~ 835444 (+) |
| ca12 | LOC106584842 | coding | downstream | 320561 | 1008749 ~ 1028587 (+) |
| man2c1 | man2c1 | coding | downstream | 387766 | 1075954 ~ 1136244 (+) |
| sema7a | LOC106584837 | coding | downstream | 479803 | 1167991 ~ 1240748 (+) |
| G2190441 | NA | non-coding | upstream | 18653 | 667991 ~ 669023 (+) |
| G2190438 | NA | non-coding | upstream | 21848 | 665517 ~ 665828 (+) |
| G2190424 | lrrc61 | non-coding | upstream | 36184 | 647500 ~ 651492 (+) |
| G2190426 | NA | non-coding | upstream | 37209 | 649938 ~ 650467 (+) |
| G2190407 | NA | non-coding | upstream | 50329 | 634972 ~ 637347 (+) |
| G2190450 | NA | non-coding | downstream | 1247 | 689435 ~ 689659 (+) |
| G2190452 | NA | non-coding | downstream | 1961 | 690149 ~ 690678 (+) |
| G2190464 | NA | non-coding | downstream | 19748 | 707936 ~ 709607 (+) |
| G2190465 | NA | non-coding | downstream | 33324 | 721512 ~ 725393 (+) |
| G2190479 | NA | non-coding | downstream | 99329 | 787517 ~ 787966 (+) |
| G2190199 | NA | other | upstream | 160210 | 523534 ~ 542502 (+) |
| G2190050 | NA | other | upstream | 325049 | 360931 ~ 362627 (+) |
| G2190529 | NA | other | downstream | 194752 | 882940 ~ 884097 (+) |
| G2190881 | NA | other | downstream | 563478 | 1251666 ~ 1252951 (+) |
| G2191047 | NA | other | downstream | 993366 | 1681554 ~ 1682049 (+) |
| G2191616 | NA | other | downstream | 1558876 | 2247064 ~ 2247502 (+) |
| G2191994 | NA | other | downstream | 2072072 | 2760260 ~ 2762972 (+) |
