Gene
RNA
| Item | Value |
|---|---|
| gene id | G2190480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 788427 ~ 788976 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2505337 | False | 248 | lncRNA | 0.38 | 2 | 788427 | 788976 |
| TU2505338 | True | 338 | lncRNA | 0.37 | 3 | 788427 | 788976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbc1d2b | tbc1d2b | coding | upstream | 5946 | 694938 ~ 782481 (+) |
| LOC110521136 | NA | coding | upstream | 178160 | 608566 ~ 616624 (+) |
| bnip2 | bnip2 | coding | upstream | 231219 | 485872 ~ 557208 (+) |
| cfap161 | LOC106584861 | coding | upstream | 404170 | 363443 ~ 384257 (+) |
| LOC110522685 | LOC105029374 | coding | upstream | 429165 | 89318 ~ 359262 (+) |
| dapk2b | dapk2 | coding | downstream | 862 | 789838 ~ 835444 (+) |
| ca12 | LOC106584842 | coding | downstream | 219773 | 1008749 ~ 1028587 (+) |
| man2c1 | man2c1 | coding | downstream | 286978 | 1075954 ~ 1136244 (+) |
| sema7a | LOC106584837 | coding | downstream | 379015 | 1167991 ~ 1240748 (+) |
| islr2 | LOC106584836 | coding | downstream | 490857 | 1279833 ~ 1284559 (+) |
| G2190479 | NA | non-coding | upstream | 461 | 787517 ~ 787966 (+) |
| G2190465 | NA | non-coding | upstream | 63034 | 721512 ~ 725393 (+) |
| G2190464 | NA | non-coding | upstream | 78820 | 707936 ~ 709607 (+) |
| G2190452 | NA | non-coding | upstream | 97749 | 690149 ~ 690678 (+) |
| G2190450 | NA | non-coding | upstream | 98768 | 689435 ~ 689659 (+) |
| G2190484 | NA | non-coding | downstream | 7682 | 796658 ~ 797269 (+) |
| G2190481 | NA | non-coding | downstream | 10310 | 799286 ~ 841111 (+) |
| G2190508 | NA | non-coding | downstream | 53138 | 842114 ~ 842518 (+) |
| G2190515 | fbxl22 | non-coding | downstream | 65328 | 854304 ~ 864263 (+) |
| G2190524 | NA | non-coding | downstream | 84430 | 873406 ~ 874299 (+) |
| G2190199 | NA | other | upstream | 260961 | 523534 ~ 542502 (+) |
| G2190050 | NA | other | upstream | 425800 | 360931 ~ 362627 (+) |
| G2190529 | NA | other | downstream | 93964 | 882940 ~ 884097 (+) |
| G2190881 | NA | other | downstream | 462690 | 1251666 ~ 1252951 (+) |
| G2191047 | NA | other | downstream | 892578 | 1681554 ~ 1682049 (+) |
| G2191616 | NA | other | downstream | 1458088 | 2247064 ~ 2247502 (+) |
| G2191994 | NA | other | downstream | 1971284 | 2760260 ~ 2762972 (+) |
