G2190508


Basic Information

Item Value
gene id G2190508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 842114 ~ 842518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505383
gcattagagagccccagtaagccagtgactcagcccctgtaatagggttagaggcagagaatcccagtggaaagaggggaaccggccaggcagacagcaagggcggttcgttgctccagagcctttccgttcaccttcccactcctgggccagactacactcaatcatatgacccactgaagagatgagtcttcagtagagacttaaaggttgagaccgagtttgcgtctctgacatgggtaggcagaccgttccataaaaattgagctctataggagaaagccctgcctccagctgtttgcttagaaattctagggacaattaggaggcctgcgtcttgtgaccgtagcttacgtgtaggtatgtacggcaggaccaaatcagagagataggtaggagcaagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505383 True 405 lncRNA 0.52 1 842114 842518

Neighbor

gene id symbol gene type direction distance location
dapk2b dapk2 coding upstream 6670 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 59633 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 231847 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 284906 485872 ~ 557208 (+)
cfap161 LOC106584861 coding upstream 457857 363443 ~ 384257 (+)
ca12 LOC106584842 coding downstream 166231 1008749 ~ 1028587 (+)
man2c1 man2c1 coding downstream 233436 1075954 ~ 1136244 (+)
sema7a LOC106584837 coding downstream 325473 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 437315 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 882880 1725398 ~ 1755496 (+)
G2190481 NA non-coding upstream 1003 799286 ~ 841111 (+)
G2190484 NA non-coding upstream 44845 796658 ~ 797269 (+)
G2190480 NA non-coding upstream 53138 788427 ~ 788976 (+)
G2190479 NA non-coding upstream 54148 787517 ~ 787966 (+)
G2190465 NA non-coding upstream 116721 721512 ~ 725393 (+)
G2190515 fbxl22 non-coding downstream 11786 854304 ~ 864263 (+)
G2190524 NA non-coding downstream 30888 873406 ~ 874299 (+)
G2190529 NA non-coding downstream 40422 882940 ~ 884097 (+)
G2190530 NA non-coding downstream 43297 885815 ~ 886775 (+)
G2190560 NA non-coding downstream 97598 940116 ~ 940438 (+)
G2190199 NA other upstream 314648 523534 ~ 542502 (+)
G2190050 NA other upstream 479487 360931 ~ 362627 (+)
G2190881 NA other downstream 409148 1251666 ~ 1252951 (+)
G2191047 NA other downstream 839036 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1404546 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1917742 2760260 ~ 2762972 (+)

Expression


Co-expression Network