G2190799


Basic Information

Item Value
gene id G2190799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1050966 ~ 1051171 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505756
CCTTACCCTGTCCACCAGCTCAACGTACTCCATATCCTTACCCTGTCCACCAGCTCAACGTACTCCTTACCCTGCGCTCCATATCCTTACCCTGCGCTCCATATCCTTACCCTGCGCTCCATATCCTTACCCTGCGCTCCATATCCTTACCCTGCGCTCCATATCCTTACCCTGTCCATCAGCTCAACGTACTCCATATCCTTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505756 True 206 lncRNA 0.53 1 1050966 1051171

Neighbor

gene id symbol gene type direction distance location
ca12 LOC106584842 coding upstream 22379 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 215522 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 268485 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 440699 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 493758 485872 ~ 557208 (+)
man2c1 man2c1 coding downstream 24783 1075954 ~ 1136244 (+)
sema7a LOC106584837 coding downstream 116820 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 228662 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 674227 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 696513 1747684 ~ 1749666 (+)
G2190794 NA non-coding upstream 3134 1047459 ~ 1047832 (+)
G2190790 NA non-coding upstream 5286 1045400 ~ 1045680 (+)
G2190748 NA non-coding upstream 17554 1031659 ~ 1033412 (+)
G2190762 NA non-coding upstream 28942 1021153 ~ 1022024 (+)
G2190736 NA non-coding upstream 83280 966961 ~ 967686 (+)
G2190800 NA non-coding downstream 11122 1062293 ~ 1067566 (+)
G2190803 NA non-coding downstream 17287 1068458 ~ 1068921 (+)
G2190819 NA non-coding downstream 52442 1103613 ~ 1105078 (+)
G2190820 NA non-coding downstream 53994 1105165 ~ 1105560 (+)
G2190829 NA non-coding downstream 81557 1132728 ~ 1133119 (+)
G2190529 NA other upstream 166869 882940 ~ 884097 (+)
G2190199 NA other upstream 523500 523534 ~ 542502 (+)
G2190050 NA other upstream 688339 360931 ~ 362627 (+)
G2190881 NA other downstream 200495 1251666 ~ 1252951 (+)
G2191047 NA other downstream 630383 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1195893 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1709089 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1842064 2892934 ~ 2915974 (+)

Expression


Co-expression Network