Gene
RNA
| Item | Value |
|---|---|
| gene id | G2190800 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 1062293 ~ 1067566 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2505759 | True | 697 | lncRNA | 0.43 | 2 | 1062293 | 1067566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ca12 | LOC106584842 | coding | upstream | 33706 | 1008749 ~ 1028587 (+) |
| dapk2b | dapk2 | coding | upstream | 226849 | 789838 ~ 835444 (+) |
| tbc1d2b | tbc1d2b | coding | upstream | 279812 | 694938 ~ 782481 (+) |
| LOC110521136 | NA | coding | upstream | 452026 | 608566 ~ 616624 (+) |
| bnip2 | bnip2 | coding | upstream | 505085 | 485872 ~ 557208 (+) |
| man2c1 | man2c1 | coding | downstream | 8388 | 1075954 ~ 1136244 (+) |
| sema7a | LOC106584837 | coding | downstream | 100425 | 1167991 ~ 1240748 (+) |
| islr2 | LOC106584836 | coding | downstream | 212267 | 1279833 ~ 1284559 (+) |
| LOC110510428 | LOC106584867 | coding | downstream | 657832 | 1725398 ~ 1755496 (+) |
| LOC118945762 | NA | coding | downstream | 680118 | 1747684 ~ 1749666 (+) |
| G2190799 | NA | non-coding | upstream | 11122 | 1050966 ~ 1051171 (+) |
| G2190794 | NA | non-coding | upstream | 14461 | 1047459 ~ 1047832 (+) |
| G2190790 | NA | non-coding | upstream | 16613 | 1045400 ~ 1045680 (+) |
| G2190748 | NA | non-coding | upstream | 28881 | 1031659 ~ 1033412 (+) |
| G2190762 | NA | non-coding | upstream | 40269 | 1021153 ~ 1022024 (+) |
| G2190803 | NA | non-coding | downstream | 892 | 1068458 ~ 1068921 (+) |
| G2190819 | NA | non-coding | downstream | 36047 | 1103613 ~ 1105078 (+) |
| G2190820 | NA | non-coding | downstream | 37599 | 1105165 ~ 1105560 (+) |
| G2190829 | NA | non-coding | downstream | 65162 | 1132728 ~ 1133119 (+) |
| G2190830 | NA | non-coding | downstream | 65717 | 1133283 ~ 1134444 (+) |
| G2190529 | NA | other | upstream | 178196 | 882940 ~ 884097 (+) |
| G2190199 | NA | other | upstream | 534827 | 523534 ~ 542502 (+) |
| G2190050 | NA | other | upstream | 699666 | 360931 ~ 362627 (+) |
| G2190881 | NA | other | downstream | 184100 | 1251666 ~ 1252951 (+) |
| G2191047 | NA | other | downstream | 613988 | 1681554 ~ 1682049 (+) |
| G2191616 | NA | other | downstream | 1179498 | 2247064 ~ 2247502 (+) |
| G2191994 | NA | other | downstream | 1692694 | 2760260 ~ 2762972 (+) |
| smad3b | LOC107755098 | other | downstream | 1825669 | 2892934 ~ 2915974 (+) |
