G2190820


Basic Information

Item Value
gene id G2190820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1105165 ~ 1105560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505786
gtaaaagagggggggaatgcaaattgtctgggtggccatttgattatatgtatattttacctttatttaactagacaagtcagttaagataaCTTATTTGTAATgacctaagaacagtgggttaactgccttgttcaggcacagaacaacagatttttaccttgtcagctcggggattcgatctagcaacctttcgattactggcccagcactcactaggctacctgccgcccctacactctaaccactatgctctacctgccgcccctacactctaaccactaggctacctgccacctctacactctaaccactaggctacttgccgcccctacactctaaccactaggctacctgttgcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505786 True 364 lncRNA 0.47 2 1105165 1105560

Neighbor

gene id symbol gene type direction distance location
ca12 LOC106584842 coding upstream 76578 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 269721 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 322684 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 494898 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 547957 485872 ~ 557208 (+)
sema7a LOC106584837 coding downstream 62431 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 174273 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 619838 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 642124 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 684036 1789596 ~ 1841114 (+)
G2190819 NA non-coding upstream 87 1103613 ~ 1105078 (+)
G2190803 NA non-coding upstream 36244 1068458 ~ 1068921 (+)
G2190800 NA non-coding upstream 37599 1062293 ~ 1067566 (+)
G2190799 NA non-coding upstream 53994 1050966 ~ 1051171 (+)
G2190794 NA non-coding upstream 57333 1047459 ~ 1047832 (+)
G2190829 NA non-coding downstream 27168 1132728 ~ 1133119 (+)
G2190830 NA non-coding downstream 27723 1133283 ~ 1134444 (+)
G2190831 NA non-coding downstream 29122 1134682 ~ 1135058 (+)
G2190833 NA non-coding downstream 36096 1141656 ~ 1149895 (+)
G2190841 NA non-coding downstream 47645 1153205 ~ 1153577 (+)
G2190529 NA other upstream 221068 882940 ~ 884097 (+)
G2190199 NA other upstream 577699 523534 ~ 542502 (+)
G2190050 NA other upstream 742538 360931 ~ 362627 (+)
G2190881 NA other downstream 146106 1251666 ~ 1252951 (+)
G2191047 NA other downstream 575994 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1141504 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1654700 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1787675 2892934 ~ 2915974 (+)

Expression


Co-expression Network