G2190830


Basic Information

Item Value
gene id G2190830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1133283 ~ 1134444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505796
aatggaaagacaagtgaaatggaaagacaagtgaaatggaaagacaagtgaaatggaaagacaaatgaaatggaaagacaaatggaaagacaaatgaaatggaaagacaaatgcaaagacaaatgaaatggaaagacaaatgaaatggaaagacaaattgaaagacaagtgaaatggaaagacacgtgaaatggaaagacaaatgaaatggaaagacaaattGAAAGACAAATGGaaagacaagtgaaatggaaaagTATCAAAAGGTTGTATGCAAGCACACTTTTCCAGACCagtctgcacattttaaagtttgAATGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505796 True 323 lncRNA 0.33 2 1133283 1134444

Neighbor

gene id symbol gene type direction distance location
ca12 LOC106584842 coding upstream 104696 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 297839 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 350802 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 523016 608566 ~ 616624 (+)
bnip2 bnip2 coding upstream 576075 485872 ~ 557208 (+)
sema7a LOC106584837 coding downstream 33547 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 145389 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 590954 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 613240 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 655152 1789596 ~ 1841114 (+)
G2190829 NA non-coding upstream 164 1132728 ~ 1133119 (+)
G2190820 NA non-coding upstream 27723 1105165 ~ 1105560 (+)
G2190819 NA non-coding upstream 28205 1103613 ~ 1105078 (+)
G2190803 NA non-coding upstream 64362 1068458 ~ 1068921 (+)
G2190800 NA non-coding upstream 65717 1062293 ~ 1067566 (+)
G2190831 NA non-coding downstream 238 1134682 ~ 1135058 (+)
G2190833 NA non-coding downstream 7212 1141656 ~ 1149895 (+)
G2190841 NA non-coding downstream 18761 1153205 ~ 1153577 (+)
G2190814 NA non-coding downstream 20310 1154754 ~ 1155235 (+)
G2190813 NA non-coding downstream 31294 1165738 ~ 1166871 (+)
G2190529 NA other upstream 249186 882940 ~ 884097 (+)
G2190199 NA other upstream 605817 523534 ~ 542502 (+)
G2190050 NA other upstream 770656 360931 ~ 362627 (+)
G2190881 NA other downstream 117222 1251666 ~ 1252951 (+)
G2191047 NA other downstream 547110 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1112620 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1625816 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1758791 2892934 ~ 2915974 (+)

Expression


Co-expression Network