G2190833


Basic Information

Item Value
gene id G2190833
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1141656 ~ 1149895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505801
AAGAGATCCTAAAGGTCATTTCATATTTCGGTTTAGGGGTTATTAACTTTATGGGAAACAATATTCACACTATGTGGATTATAAACATGTACATACATAGAGAGCCAGTTCTTGAATCCATACATTTTCAGCCCTGTAGCCCTTCTTGGGGTGATTCTGCGCAATGCACTTGGGCCACAGTTGTGCGTTGGTTGTTGGGGCATGGAATGTGTAGCAGGTGGGTTGAG

Function

NR:

description
zinc finger protein 391-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505801 True 227 lncRNA 0.43 2 1141656 1149895

Neighbor

gene id symbol gene type direction distance location
man2c1 man2c1 coding upstream 5412 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 113069 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 306212 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 359175 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 531389 608566 ~ 616624 (+)
sema7a LOC106584837 coding downstream 18096 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 129938 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 575503 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 597789 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 639701 1789596 ~ 1841114 (+)
G2190831 NA non-coding upstream 6598 1134682 ~ 1135058 (+)
G2190830 NA non-coding upstream 7212 1133283 ~ 1134444 (+)
G2190829 NA non-coding upstream 8537 1132728 ~ 1133119 (+)
G2190820 NA non-coding upstream 36096 1105165 ~ 1105560 (+)
G2190819 NA non-coding upstream 36578 1103613 ~ 1105078 (+)
G2190841 NA non-coding downstream 3310 1153205 ~ 1153577 (+)
G2190814 NA non-coding downstream 4859 1154754 ~ 1155235 (+)
G2190813 NA non-coding downstream 15843 1165738 ~ 1166871 (+)
G2190847 NA non-coding downstream 33731 1183626 ~ 1185348 (+)
G2190848 NA non-coding downstream 34486 1184381 ~ 1185652 (+)
G2190529 NA other upstream 257559 882940 ~ 884097 (+)
G2190199 NA other upstream 614190 523534 ~ 542502 (+)
G2190050 NA other upstream 779029 360931 ~ 362627 (+)
G2190881 NA other downstream 101771 1251666 ~ 1252951 (+)
G2191047 NA other downstream 531659 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1097169 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1610365 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1743340 2892934 ~ 2915974 (+)

Expression


Co-expression Network