Gene
RNA
| Item | Value |
|---|---|
| gene id | G2190814 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 1154754 ~ 1155235 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2505778 | True | 482 | lncRNA | 0.43 | 1 | 1154754 | 1155235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| man2c1 | man2c1 | coding | upstream | 18510 | 1075954 ~ 1136244 (+) |
| ca12 | LOC106584842 | coding | upstream | 126167 | 1008749 ~ 1028587 (+) |
| dapk2b | dapk2 | coding | upstream | 319310 | 789838 ~ 835444 (+) |
| tbc1d2b | tbc1d2b | coding | upstream | 372273 | 694938 ~ 782481 (+) |
| LOC110521136 | NA | coding | upstream | 544487 | 608566 ~ 616624 (+) |
| sema7a | LOC106584837 | coding | downstream | 12756 | 1167991 ~ 1240748 (+) |
| islr2 | LOC106584836 | coding | downstream | 124598 | 1279833 ~ 1284559 (+) |
| LOC110510428 | LOC106584867 | coding | downstream | 570163 | 1725398 ~ 1755496 (+) |
| LOC118945762 | NA | coding | downstream | 592449 | 1747684 ~ 1749666 (+) |
| hacd3 | hacd3 | coding | downstream | 634361 | 1789596 ~ 1841114 (+) |
| G2190841 | NA | non-coding | upstream | 1177 | 1153205 ~ 1153577 (+) |
| G2190833 | NA | non-coding | upstream | 4859 | 1141656 ~ 1149895 (+) |
| G2190831 | NA | non-coding | upstream | 19696 | 1134682 ~ 1135058 (+) |
| G2190830 | NA | non-coding | upstream | 20310 | 1133283 ~ 1134444 (+) |
| G2190829 | NA | non-coding | upstream | 21635 | 1132728 ~ 1133119 (+) |
| G2190813 | NA | non-coding | downstream | 10503 | 1165738 ~ 1166871 (+) |
| G2190847 | NA | non-coding | downstream | 28391 | 1183626 ~ 1185348 (+) |
| G2190848 | NA | non-coding | downstream | 29146 | 1184381 ~ 1185652 (+) |
| G2190853 | NA | non-coding | downstream | 34949 | 1190184 ~ 1191183 (+) |
| G2190875 | NA | non-coding | downstream | 72375 | 1227610 ~ 1228239 (+) |
| G2190529 | NA | other | upstream | 270657 | 882940 ~ 884097 (+) |
| G2190199 | NA | other | upstream | 627288 | 523534 ~ 542502 (+) |
| G2190050 | NA | other | upstream | 792127 | 360931 ~ 362627 (+) |
| G2190881 | NA | other | downstream | 96431 | 1251666 ~ 1252951 (+) |
| G2191047 | NA | other | downstream | 526319 | 1681554 ~ 1682049 (+) |
| G2191616 | NA | other | downstream | 1091829 | 2247064 ~ 2247502 (+) |
| G2191994 | NA | other | downstream | 1605025 | 2760260 ~ 2762972 (+) |
| smad3b | LOC107755098 | other | downstream | 1738000 | 2892934 ~ 2915974 (+) |
