G2190813


Basic Information

Item Value
gene id G2190813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1165738 ~ 1166871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505777
GATTTTCGACCAATACTTGCCGATACCGTCTTCATCCTCGATTAGAGGAAACAGGAGTCTCATAAAATGTAATTGTCCAGTTGCAGGGGGGTCagtttgaatttagaaaatgctctGTTATTTTTGCTCCATGAAGTAATCCCCAAAAAATTTACGCCACCATCTTGTCTATCTCAAGTATTCTGTCATTGGTCAAGACAGCTGGGTGTCCTGATAACAGACTCCTGTCTGGAATAAACAACATTATGAGACTCTAACCACTCCACCTGGAATAAACAACATTATGGGACTGAAACCATTCCACCTGGAATAAACAACATTATGAGACTGAAACCATCCCACCTGGAATAAACAACATTATGAGACTCTAACCACTCCACCTGGAATAAACAACATTATGAGACTAACCACTCCACCTGGAATAAACAACATTATGGGACTGAAACCATCCCATCTGGAATAAACAACATTATGGGACTGAAACCATTCCACCTGGAAAAAACAACAGTATGGGTCTGAAACCACTCCACCTGGAATAAATAACATTATGAGACGGAAACCATTCCACCTGGAATAAACAACATTATGGGACTGAAACCACTCCACCTGGAATAAACAACATTATGAGACTGAAACCATTCCACCTGGAATAAACAACATTATGGGACTGAAACCACTCCACCTGGAATAAACAACATTATGAGACTGAAACCATTCCACCTGGAAAAAACAACAGTATGGGACTGAAACCACTCCACCTGGAATAAACAACATTATGGGACTGAAACCACTCCACCTGGAATAAACAACATTATGAGACTGAAACTATCCCACCTGGAATAAACAACATTATGGGACTGAAACCACTCCACCTGGAATAAATAACATTATGGGACTGAAACCACTCAATCTGGAATAAACAACATTATGGGACTGAAACCACTCCACCTGGAATAAACAACATTATGGGACTGAAACCATTCCACCTGGAATAAACAACATTATGGGACTGAAACCATTCCACCTGGAATAAACAACATTATGGGACTGAAACCATTCCACCTGGAATAAACAACATTATGGGACTGAAACCATTCCACatggaaaaaaaatgaaaataaaaacattcaaTCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591787 isoform X36

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505777 True 1134 lncRNA 0.39 1 1165738 1166871

Neighbor

gene id symbol gene type direction distance location
man2c1 man2c1 coding upstream 29494 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 137151 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 330294 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 383257 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 555471 608566 ~ 616624 (+)
sema7a LOC106584837 coding downstream 1120 1167991 ~ 1240748 (+)
islr2 LOC106584836 coding downstream 112962 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 558527 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 580813 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 622725 1789596 ~ 1841114 (+)
G2190814 NA non-coding upstream 10503 1154754 ~ 1155235 (+)
G2190841 NA non-coding upstream 12161 1153205 ~ 1153577 (+)
G2190833 NA non-coding upstream 15843 1141656 ~ 1149895 (+)
G2190831 NA non-coding upstream 30680 1134682 ~ 1135058 (+)
G2190830 NA non-coding upstream 31294 1133283 ~ 1134444 (+)
G2190847 NA non-coding downstream 16755 1183626 ~ 1185348 (+)
G2190848 NA non-coding downstream 17510 1184381 ~ 1185652 (+)
G2190853 NA non-coding downstream 23313 1190184 ~ 1191183 (+)
G2190875 NA non-coding downstream 60739 1227610 ~ 1228239 (+)
G2190876 NA non-coding downstream 61827 1228698 ~ 1233550 (+)
G2190529 NA other upstream 281641 882940 ~ 884097 (+)
G2190199 NA other upstream 638272 523534 ~ 542502 (+)
G2190050 NA other upstream 803111 360931 ~ 362627 (+)
G2190881 NA other downstream 84795 1251666 ~ 1252951 (+)
G2191047 NA other downstream 514683 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1080193 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1593389 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1726364 2892934 ~ 2915974 (+)

Expression


Co-expression Network