G2190848


Basic Information

Item Value
gene id G2190848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1184381 ~ 1185652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505816
cactatacacactatacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacactatacacactatacacactatacactatatacactatacacactctacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacactatacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacacactatacactatatacactatacacactctacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacactatacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacactatacacactatacacactatacactatatacactatacacgctatacactatacacactatacactatacacactaaaCAATATACACACTAaacaatatacacactatacactatacacactttacactatacactatacacactatacactatacatactatacactatacacactatacacactatacactatacacactatacacactatacactatacacactatacactatacacactatacacactacactatacacactatacactatacacactatacactatacactatacacactatatacactatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505816 True 769 lncRNA 0.31 2 1184381 1185652

Neighbor

gene id symbol gene type direction distance location
man2c1 man2c1 coding upstream 48137 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 155794 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 348937 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 401900 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 574114 608566 ~ 616624 (+)
islr2 LOC106584836 coding downstream 94181 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 539746 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 562032 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 603944 1789596 ~ 1841114 (+)
LOC118945831 LOC106591986 coding downstream 793583 1979235 ~ 2008439 (+)
G2190813 NA non-coding upstream 17510 1165738 ~ 1166871 (+)
G2190814 NA non-coding upstream 29146 1154754 ~ 1155235 (+)
G2190841 NA non-coding upstream 30804 1153205 ~ 1153577 (+)
G2190833 NA non-coding upstream 34486 1141656 ~ 1149895 (+)
G2190831 NA non-coding upstream 49323 1134682 ~ 1135058 (+)
G2190853 NA non-coding downstream 4532 1190184 ~ 1191183 (+)
G2190875 NA non-coding downstream 41958 1227610 ~ 1228239 (+)
G2190876 NA non-coding downstream 43046 1228698 ~ 1233550 (+)
G2190807 NA non-coding downstream 58355 1244007 ~ 1245822 (+)
G2190888 LOC106584835 non-coding downstream 99756 1285408 ~ 1288020 (+)
G2190529 NA other upstream 300284 882940 ~ 884097 (+)
G2190199 NA other upstream 656915 523534 ~ 542502 (+)
G2190050 NA other upstream 821754 360931 ~ 362627 (+)
G2190881 NA other downstream 66014 1251666 ~ 1252951 (+)
G2191047 NA other downstream 495902 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1061412 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1574608 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1707583 2892934 ~ 2915974 (+)

Expression


Co-expression Network