G2190853


Basic Information

Item Value
gene id G2190853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1190184 ~ 1191183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505821
GATAACGGTAACACCTGATAACGGTAACACCTGATAACGGACCTGATAACGGTAACACCTGATAACGGTAACACCTGATAACGGACCTGATAACGGACCTGATAACGGTAACACCTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTAGGTCTACATCCACTTTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTAGGTCTACATCCACTCTGCTGCTACTACGTCCTGCATCGGGATCCCTCTGTCAGAAGTACCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505821 True 346 lncRNA 0.50 3 1190184 1191183

Neighbor

gene id symbol gene type direction distance location
man2c1 man2c1 coding upstream 53940 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 161597 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 354740 789838 ~ 835444 (+)
tbc1d2b tbc1d2b coding upstream 407703 694938 ~ 782481 (+)
LOC110521136 NA coding upstream 579917 608566 ~ 616624 (+)
islr2 LOC106584836 coding downstream 88650 1279833 ~ 1284559 (+)
LOC110510428 LOC106584867 coding downstream 534215 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 556501 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 598413 1789596 ~ 1841114 (+)
LOC118945831 LOC106591986 coding downstream 788052 1979235 ~ 2008439 (+)
G2190848 NA non-coding upstream 4532 1184381 ~ 1185652 (+)
G2190847 NA non-coding upstream 4836 1183626 ~ 1185348 (+)
G2190813 NA non-coding upstream 23313 1165738 ~ 1166871 (+)
G2190814 NA non-coding upstream 34949 1154754 ~ 1155235 (+)
G2190841 NA non-coding upstream 36607 1153205 ~ 1153577 (+)
G2190875 NA non-coding downstream 36427 1227610 ~ 1228239 (+)
G2190876 NA non-coding downstream 37515 1228698 ~ 1233550 (+)
G2190807 NA non-coding downstream 52824 1244007 ~ 1245822 (+)
G2190888 LOC106584835 non-coding downstream 94225 1285408 ~ 1288020 (+)
G2190894 NA non-coding downstream 114651 1305834 ~ 1314502 (+)
G2190529 NA other upstream 306087 882940 ~ 884097 (+)
G2190199 NA other upstream 662718 523534 ~ 542502 (+)
G2190050 NA other upstream 827557 360931 ~ 362627 (+)
G2190881 NA other downstream 60483 1251666 ~ 1252951 (+)
G2191047 NA other downstream 490371 1681554 ~ 1682049 (+)
G2191616 NA other downstream 1055881 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1569077 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1702052 2892934 ~ 2915974 (+)

Expression


Co-expression Network