Gene
RNA
| Item | Value |
|---|---|
| gene id | G2190938 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 1406232 ~ 1408487 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2505932 | False | 238 | lncRNA | 0.39 | 2 | 1406232 | 1408487 |
| TU2505930 | True | 282 | lncRNA | 0.38 | 2 | 1407098 | 1407873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| islr2 | LOC106584836 | coding | upstream | 121673 | 1279833 ~ 1284559 (+) |
| sema7a | LOC106584837 | coding | upstream | 165484 | 1167991 ~ 1240748 (+) |
| man2c1 | man2c1 | coding | upstream | 269988 | 1075954 ~ 1136244 (+) |
| ca12 | LOC106584842 | coding | upstream | 377645 | 1008749 ~ 1028587 (+) |
| dapk2b | dapk2 | coding | upstream | 570788 | 789838 ~ 835444 (+) |
| LOC110510428 | LOC106584867 | coding | downstream | 316911 | 1725398 ~ 1755496 (+) |
| LOC118945762 | NA | coding | downstream | 339197 | 1747684 ~ 1749666 (+) |
| hacd3 | hacd3 | coding | downstream | 381109 | 1789596 ~ 1841114 (+) |
| LOC118945831 | LOC106591986 | coding | downstream | 570748 | 1979235 ~ 2008439 (+) |
| LOC110521156 | NA | coding | downstream | 1116206 | 2524693 ~ 2529356 (+) |
| G2190914 | NA | non-coding | upstream | 52921 | 1351907 ~ 1353311 (+) |
| G2190900 | NA | non-coding | upstream | 87420 | 1315545 ~ 1318812 (+) |
| G2190894 | NA | non-coding | upstream | 91730 | 1305834 ~ 1314502 (+) |
| G2190888 | LOC106584835 | non-coding | upstream | 118212 | 1285408 ~ 1288020 (+) |
| G2190807 | NA | non-coding | upstream | 160410 | 1244007 ~ 1245822 (+) |
| G2190957 | NA | non-coding | downstream | 39335 | 1447822 ~ 1448166 (+) |
| G2190964 | NA | non-coding | downstream | 44357 | 1452844 ~ 1453059 (+) |
| G2190965 | NA | non-coding | downstream | 46095 | 1454582 ~ 1454847 (+) |
| G2190973 | NA | non-coding | downstream | 58988 | 1467475 ~ 1467714 (+) |
| G2190984 | NA | non-coding | downstream | 78587 | 1487074 ~ 1487288 (+) |
| G2190881 | NA | other | upstream | 153281 | 1251666 ~ 1252951 (+) |
| G2190529 | NA | other | upstream | 522135 | 882940 ~ 884097 (+) |
| LOC110521136 | NA | other | upstream | 789608 | 608566 ~ 616624 (+) |
| G2190199 | NA | other | upstream | 878766 | 523534 ~ 542502 (+) |
| G2190050 | NA | other | upstream | 1043605 | 360931 ~ 362627 (+) |
| G2191047 | NA | other | downstream | 273067 | 1681554 ~ 1682049 (+) |
| G2191616 | NA | other | downstream | 838577 | 2247064 ~ 2247502 (+) |
| G2191994 | NA | other | downstream | 1351773 | 2760260 ~ 2762972 (+) |
| smad3b | LOC107755098 | other | downstream | 1484748 | 2892934 ~ 2915974 (+) |
| G2192059 | NA | other | downstream | 1514414 | 2922901 ~ 2924465 (+) |
