G2190964


Basic Information

Item Value
gene id G2190964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1452844 ~ 1453059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505959
gataaagagagtagagagagggagaggaaagtgagaatgagagagagaaggaaagagagaacacGAGTGAGAGatcaagagagggagaagagactgataaagagagagaggagagagaaggagactcaTAAAGGCTGTCTCTAACCCTGCTGGGAGATGGTTCTTCTGGAGAGTTGAGCTGAGGAGCCCAGCATCAgagttccctgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505959 True 216 lncRNA 0.49 1 1452844 1453059

Neighbor

gene id symbol gene type direction distance location
islr2 LOC106584836 coding upstream 168285 1279833 ~ 1284559 (+)
sema7a LOC106584837 coding upstream 212096 1167991 ~ 1240748 (+)
man2c1 man2c1 coding upstream 316600 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 424257 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 617400 789838 ~ 835444 (+)
LOC110510428 LOC106584867 coding downstream 272339 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 294625 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 336537 1789596 ~ 1841114 (+)
LOC118945831 LOC106591986 coding downstream 526176 1979235 ~ 2008439 (+)
LOC110521156 NA coding downstream 1071634 2524693 ~ 2529356 (+)
G2190957 NA non-coding upstream 4678 1447822 ~ 1448166 (+)
G2190938 NA non-coding upstream 44357 1406232 ~ 1408487 (+)
G2190914 NA non-coding upstream 99533 1351907 ~ 1353311 (+)
G2190900 NA non-coding upstream 134032 1315545 ~ 1318812 (+)
G2190894 NA non-coding upstream 138342 1305834 ~ 1314502 (+)
G2190965 NA non-coding downstream 1523 1454582 ~ 1454847 (+)
G2190973 NA non-coding downstream 14416 1467475 ~ 1467714 (+)
G2190984 NA non-coding downstream 34015 1487074 ~ 1487288 (+)
G2191003 NA non-coding downstream 98364 1551423 ~ 1631603 (+)
G2191041 NA non-coding downstream 216090 1669149 ~ 1669371 (+)
G2190881 NA other upstream 199893 1251666 ~ 1252951 (+)
G2190529 NA other upstream 568747 882940 ~ 884097 (+)
LOC110521136 NA other upstream 836220 608566 ~ 616624 (+)
G2190199 NA other upstream 925378 523534 ~ 542502 (+)
G2190050 NA other upstream 1090217 360931 ~ 362627 (+)
G2191047 NA other downstream 228495 1681554 ~ 1682049 (+)
G2191616 NA other downstream 794005 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1307201 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1440176 2892934 ~ 2915974 (+)
G2192059 NA other downstream 1469842 2922901 ~ 2924465 (+)

Expression


Co-expression Network