G2190965


Basic Information

Item Value
gene id G2190965
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 1454582 ~ 1454847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2505960
ttacaggtaacctttgagatattttgtagtcatgtcgCACgtgttggaaccggtgtttttctgaatcaaacgcgccaaataaatggacattttggataaatattaacggaattaatcgaacaaaaggaccatttgtgatgtttatgggacatattggagtgccaacagaagaagatcttcaaaggtaaggcatgaattatatcgttatttctgagttttgtgtcacgcctggcgggttgaaatatgattgtcatgtgtaTGTTtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2505960 True 266 lncRNA 0.38 1 1454582 1454847

Neighbor

gene id symbol gene type direction distance location
islr2 LOC106584836 coding upstream 170023 1279833 ~ 1284559 (+)
sema7a LOC106584837 coding upstream 213834 1167991 ~ 1240748 (+)
man2c1 man2c1 coding upstream 318338 1075954 ~ 1136244 (+)
ca12 LOC106584842 coding upstream 425995 1008749 ~ 1028587 (+)
dapk2b dapk2 coding upstream 619138 789838 ~ 835444 (+)
LOC110510428 LOC106584867 coding downstream 270551 1725398 ~ 1755496 (+)
LOC118945762 NA coding downstream 292837 1747684 ~ 1749666 (+)
hacd3 hacd3 coding downstream 334749 1789596 ~ 1841114 (+)
LOC118945831 LOC106591986 coding downstream 524388 1979235 ~ 2008439 (+)
LOC110521156 NA coding downstream 1069846 2524693 ~ 2529356 (+)
G2190964 NA non-coding upstream 1523 1452844 ~ 1453059 (+)
G2190957 NA non-coding upstream 6416 1447822 ~ 1448166 (+)
G2190938 NA non-coding upstream 46095 1406232 ~ 1408487 (+)
G2190914 NA non-coding upstream 101271 1351907 ~ 1353311 (+)
G2190900 NA non-coding upstream 135770 1315545 ~ 1318812 (+)
G2190973 NA non-coding downstream 12628 1467475 ~ 1467714 (+)
G2190984 NA non-coding downstream 32227 1487074 ~ 1487288 (+)
G2191003 NA non-coding downstream 96576 1551423 ~ 1631603 (+)
G2191041 NA non-coding downstream 214302 1669149 ~ 1669371 (+)
G2191042 NA non-coding downstream 214751 1669598 ~ 1669815 (+)
G2190881 NA other upstream 201631 1251666 ~ 1252951 (+)
G2190529 NA other upstream 570485 882940 ~ 884097 (+)
LOC110521136 NA other upstream 837958 608566 ~ 616624 (+)
G2190199 NA other upstream 927116 523534 ~ 542502 (+)
G2190050 NA other upstream 1091955 360931 ~ 362627 (+)
G2191047 NA other downstream 226707 1681554 ~ 1682049 (+)
G2191616 NA other downstream 792217 2247064 ~ 2247502 (+)
G2191994 NA other downstream 1305413 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 1438388 2892934 ~ 2915974 (+)
G2192059 NA other downstream 1468054 2922901 ~ 2924465 (+)

Expression


Co-expression Network