G2191181


Basic Information

Item Value
gene id G2191181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2127035 ~ 2127241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506220
cattttacagtttctctagagataaatcagatccagcctgaactgtgtgatgtagtagggagttgtagtttctctagagataaatcagatccagcctgaactgtgtgatgtagtagggagttgtagtttccaacaggccaatattctacatagtttagcgtAGGAAACTtgataattaactacaatgaaaATGACATGATCTAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506220 True 207 lncRNA 0.37 1 2127035 2127241

Neighbor

gene id symbol gene type direction distance location
LOC118945831 LOC106591986 coding upstream 118596 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 285921 1789596 ~ 1841114 (+)
LOC110510428 LOC106584867 coding upstream 371539 1725398 ~ 1755496 (+)
LOC118945762 NA coding upstream 377369 1747684 ~ 1749666 (+)
islr2 LOC106584836 coding upstream 842476 1279833 ~ 1284559 (+)
LOC110521156 NA coding downstream 397452 2524693 ~ 2529356 (+)
map2k1 map2k1 coding downstream 408719 2535960 ~ 2587854 (+)
zwilch zwilch coding downstream 467201 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 684652 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 704772 2832013 ~ 2837148 (+)
G2191174 NA non-coding upstream 16709 2109084 ~ 2110326 (+)
G2191161 NA non-coding upstream 47041 2057166 ~ 2079994 (+)
G2191146 NA non-coding upstream 116556 2010278 ~ 2010479 (+)
G2191129 LOC106584873 non-coding upstream 165554 1961231 ~ 1961481 (+)
G2191126 LOC106584873 non-coding upstream 173418 1953228 ~ 1953617 (+)
G2191183 NA non-coding downstream 1352 2128593 ~ 2129172 (+)
G2191195 NA non-coding downstream 60743 2187984 ~ 2188225 (+)
G2191196 NA non-coding downstream 62056 2189297 ~ 2189510 (+)
G2191199 NA non-coding downstream 67909 2195150 ~ 2195398 (+)
G2191597 NA non-coding downstream 100025 2227266 ~ 2227516 (+)
G2191047 NA other upstream 444986 1681554 ~ 1682049 (+)
G2190881 NA other upstream 874084 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1242938 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1510411 608566 ~ 616624 (+)
G2190199 NA other upstream 1599569 523534 ~ 542502 (+)
G2191616 NA other downstream 119823 2247064 ~ 2247502 (+)
G2191994 NA other downstream 633019 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 765994 2892934 ~ 2915974 (+)
G2192059 NA other downstream 795660 2922901 ~ 2924465 (+)
iqch LOC106584827 other downstream 913179 2941093 ~ 3052608 (+)

Expression


Co-expression Network