G2191598


Basic Information

Item Value
gene id G2191598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2227560 ~ 2227821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506785
tcctcaatgtgatcaagacaaaggagatgattgtggactacaggaaaagaaggactgagcacgcccccattctcatcaacagggctgtagtggagcaggttgagagctccaagttccttggtgtctacatcaccaacaaattatcatggtccaaacacaccaagacagtcgtgaagaggacacgacaaagcctatttccactcaggagactgaaaagatttggcatgggtcctcagatcctcaaaaagttctacacctgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506785 True 262 lncRNA 0.47 1 2227560 2227821

Neighbor

gene id symbol gene type direction distance location
LOC118945831 LOC106591986 coding upstream 219121 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 386446 1789596 ~ 1841114 (+)
LOC110510428 LOC106584867 coding upstream 472064 1725398 ~ 1755496 (+)
LOC118945762 NA coding upstream 477894 1747684 ~ 1749666 (+)
islr2 LOC106584836 coding upstream 943001 1279833 ~ 1284559 (+)
LOC110521156 NA coding downstream 296872 2524693 ~ 2529356 (+)
map2k1 map2k1 coding downstream 308139 2535960 ~ 2587854 (+)
zwilch zwilch coding downstream 366621 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 584072 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 604192 2832013 ~ 2837148 (+)
G2191597 NA non-coding upstream 44 2227266 ~ 2227516 (+)
G2191199 NA non-coding upstream 32162 2195150 ~ 2195398 (+)
G2191196 NA non-coding upstream 38050 2189297 ~ 2189510 (+)
G2191195 NA non-coding upstream 39335 2187984 ~ 2188225 (+)
G2191183 NA non-coding upstream 98388 2128593 ~ 2129172 (+)
G2191599 NA non-coding downstream 685 2228506 ~ 2228954 (+)
G2191607 NA non-coding downstream 9453 2237274 ~ 2237482 (+)
G2191608 NA non-coding downstream 10209 2238030 ~ 2238345 (+)
G2191611 NA non-coding downstream 11226 2239047 ~ 2239307 (+)
G2191617 NA non-coding downstream 20056 2247877 ~ 2248163 (+)
G2191047 NA other upstream 545511 1681554 ~ 1682049 (+)
G2190881 NA other upstream 974609 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1343463 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1610936 608566 ~ 616624 (+)
G2190199 NA other upstream 1700094 523534 ~ 542502 (+)
G2191616 NA other downstream 19243 2247064 ~ 2247502 (+)
G2191994 NA other downstream 532439 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 665414 2892934 ~ 2915974 (+)
G2192059 NA other downstream 695080 2922901 ~ 2924465 (+)
iqch LOC106584827 other downstream 812599 2941093 ~ 3052608 (+)

Expression


Co-expression Network