G2191617


Basic Information

Item Value
gene id G2191617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2247877 ~ 2248163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506804
acctacaccacccgatgtcacaggaaggccataaagatcatcaaggacatcaaccacccgagccactgcctgttcatcccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacactgagtggctgctgccaacacactgacactgactcaactccagccactttaacaatgggaattgatgggaaatgatgtaaatatatcactagccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506804 True 287 lncRNA 0.49 1 2247877 2248163

Neighbor

gene id symbol gene type direction distance location
LOC118945831 LOC106591986 coding upstream 239438 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 406763 1789596 ~ 1841114 (+)
LOC110510428 LOC106584867 coding upstream 492381 1725398 ~ 1755496 (+)
LOC118945762 NA coding upstream 498211 1747684 ~ 1749666 (+)
islr2 LOC106584836 coding upstream 963318 1279833 ~ 1284559 (+)
LOC110521156 NA coding downstream 276530 2524693 ~ 2529356 (+)
map2k1 map2k1 coding downstream 287797 2535960 ~ 2587854 (+)
zwilch zwilch coding downstream 346279 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 563730 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 583850 2832013 ~ 2837148 (+)
G2191611 NA non-coding upstream 8570 2239047 ~ 2239307 (+)
G2191608 NA non-coding upstream 9532 2238030 ~ 2238345 (+)
G2191607 NA non-coding upstream 10395 2237274 ~ 2237482 (+)
G2191599 NA non-coding upstream 18923 2228506 ~ 2228954 (+)
G2191598 NA non-coding upstream 20056 2227560 ~ 2227821 (+)
G2191626 NA non-coding downstream 7567 2255730 ~ 2255941 (+)
G2191631 NA non-coding downstream 29071 2277234 ~ 2277433 (+)
G2191653 NA non-coding downstream 81391 2329554 ~ 2329983 (+)
G2191671 NA non-coding downstream 160212 2408375 ~ 2408651 (+)
G2191707 NA non-coding downstream 255294 2503457 ~ 2582805 (+)
G2191616 NA other upstream 375 2247064 ~ 2247502 (+)
G2191047 NA other upstream 565828 1681554 ~ 1682049 (+)
G2190881 NA other upstream 994926 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1363780 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1631253 608566 ~ 616624 (+)
G2191994 NA other downstream 512097 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 645072 2892934 ~ 2915974 (+)
G2192059 NA other downstream 674738 2922901 ~ 2924465 (+)
iqch LOC106584827 other downstream 792257 2941093 ~ 3052608 (+)
LOC110521165 fintrim other downstream 1536344 3784498 ~ 3796399 (+)

Expression


Co-expression Network