G2191626


Basic Information

Item Value
gene id G2191626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2255730 ~ 2255941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506816
CCAtaacaatcacatcagatctgacccagacccataacaatcacatcagatctgaCCCAGACCCATAACAATCATATCAGATCCTACCCAGACCCATAACAATCACATCAGATCCTACCCAGACCCATAACAATCACATCAGATCCTACCCAGACCCATAACAATCACATCAGATCCTACCCAGACCCATAACAATCACATCAGATCCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506816 True 212 lncRNA 0.44 1 2255730 2255941

Neighbor

gene id symbol gene type direction distance location
LOC118945831 LOC106591986 coding upstream 247291 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 414616 1789596 ~ 1841114 (+)
LOC110510428 LOC106584867 coding upstream 500234 1725398 ~ 1755496 (+)
LOC118945762 NA coding upstream 506064 1747684 ~ 1749666 (+)
islr2 LOC106584836 coding upstream 971171 1279833 ~ 1284559 (+)
LOC110521156 NA coding downstream 268752 2524693 ~ 2529356 (+)
map2k1 map2k1 coding downstream 280019 2535960 ~ 2587854 (+)
zwilch zwilch coding downstream 338501 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 555952 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 576072 2832013 ~ 2837148 (+)
G2191617 NA non-coding upstream 7567 2247877 ~ 2248163 (+)
G2191611 NA non-coding upstream 16423 2239047 ~ 2239307 (+)
G2191608 NA non-coding upstream 17385 2238030 ~ 2238345 (+)
G2191607 NA non-coding upstream 18248 2237274 ~ 2237482 (+)
G2191599 NA non-coding upstream 26776 2228506 ~ 2228954 (+)
G2191631 NA non-coding downstream 21293 2277234 ~ 2277433 (+)
G2191653 NA non-coding downstream 73613 2329554 ~ 2329983 (+)
G2191671 NA non-coding downstream 152434 2408375 ~ 2408651 (+)
G2191707 NA non-coding downstream 247516 2503457 ~ 2582805 (+)
G2191616 NA other upstream 8228 2247064 ~ 2247502 (+)
G2191047 NA other upstream 573681 1681554 ~ 1682049 (+)
G2190881 NA other upstream 1002779 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1371633 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1639106 608566 ~ 616624 (+)
G2191994 NA other downstream 504319 2760260 ~ 2762972 (+)
smad3b LOC107755098 other downstream 637294 2892934 ~ 2915974 (+)
G2192059 NA other downstream 666960 2922901 ~ 2924465 (+)
iqch LOC106584827 other downstream 784479 2941093 ~ 3052608 (+)
LOC110521165 fintrim other downstream 1528566 3784498 ~ 3796399 (+)

Expression


Co-expression Network