G2191724


Basic Information

Item Value
gene id G2191724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2589212 ~ 2589629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506932
TTTTTTCTTTAAACCGGCTGGGGCGCCGCGTAACGCCCGTTCTACTCACTTGTAGTCCACCTTGAGAGAGGCAGACTTGCGCCAGGTCCCGTAGAGCTGATCCAGCTTGCGGAAGGCGGACTCGGTCCAGATACAGAACCGACCAACGTGACCTCCGGGGGCGAGCCTCAGCAGGTTCAGCTTGTTCACGTTCTGCAGGGTGATGCCTGGGTGAAAGAGCGGCAAATACACATGACACCAGACACGAATAAGTAAATAAACATTATATTAGAGAAATAGTTAGAACTATTGATTTTTGTATTGGTTTTGGTCCTACACAAAAACATAATATTAAACCATCATGACTGATATCAGGTTGGGCTCAGAA

Function

NR:

description
60S ribosomal protein L4-B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506932 True 367 lncRNA 0.48 2 2589212 2589629

Neighbor

gene id symbol gene type direction distance location
map2k1 map2k1 coding upstream 1358 2535960 ~ 2587854 (+)
LOC110521156 NA coding upstream 59856 2524693 ~ 2529356 (+)
LOC118945831 LOC106591986 coding upstream 580773 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 748098 1789596 ~ 1841114 (+)
LOC110510428 LOC106584867 coding upstream 833716 1725398 ~ 1755496 (+)
zwilch zwilch coding downstream 4813 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 222264 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 242384 2832013 ~ 2837148 (+)
smad3b LOC107755098 coding downstream 303305 2892934 ~ 2915974 (+)
iqch LOC106584827 coding downstream 351464 2941093 ~ 3052608 (+)
G2191707 NA non-coding upstream 6407 2503457 ~ 2582805 (+)
G2191739 NA non-coding upstream 18268 2570127 ~ 2570944 (+)
G2191671 NA non-coding upstream 180561 2408375 ~ 2408651 (+)
G2191653 NA non-coding upstream 259229 2329554 ~ 2329983 (+)
G2191725 NA non-coding downstream 3486 2593115 ~ 2594017 (+)
G2191750 NA non-coding downstream 39379 2629008 ~ 2629646 (+)
G2191761 NA non-coding downstream 43067 2632696 ~ 2633085 (+)
G2191765 NA non-coding downstream 49875 2639504 ~ 2640154 (+)
G2191766 NA non-coding downstream 50740 2640369 ~ 2643097 (+)
G2191616 NA other upstream 341710 2247064 ~ 2247502 (+)
G2191047 NA other upstream 907163 1681554 ~ 1682049 (+)
G2190881 NA other upstream 1336261 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1705115 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1972588 608566 ~ 616624 (+)
G2191994 NA other downstream 170631 2760260 ~ 2762972 (+)
G2192059 NA other downstream 333272 2922901 ~ 2924465 (+)
LOC110521165 fintrim other downstream 1194878 3784498 ~ 3796399 (+)

Expression


Co-expression Network