G2191725


Basic Information

Item Value
gene id G2191725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2593115 ~ 2594017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2506938
TCACCTGCCAGTCCGCTGACGGCATAAGGCTGACGACTGTTCTTGCGCATGTTGGTGTGCACGAAGTTGACAATGTCGGGGCGGATGGGAGCCTTGAACACCGCAGGCATGACAACATTTTTGCCTGAGCTTTCTCCTTTCTCGGAGTAGATCGAGATTAAAGGCCGGGCACAAGCCATTTTTATGTTTTAGTCTCGGCTCGCCGACGAACCACGCTCCTTACTCAATGGCGGC

Function

NR:

description
putative ribosomal protein L4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2506938 True 234 lncRNA 0.54 2 2593115 2594017

Neighbor

gene id symbol gene type direction distance location
map2k1 map2k1 coding upstream 5261 2535960 ~ 2587854 (+)
LOC110521156 NA coding upstream 63759 2524693 ~ 2529356 (+)
LOC118945831 LOC106591986 coding upstream 584676 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 752001 1789596 ~ 1841114 (+)
LOC118945762 NA coding upstream 843449 1747684 ~ 1749666 (+)
zwilch zwilch coding downstream 425 2594442 ~ 2633284 (+)
smad6b smad6 coding downstream 217876 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 237996 2832013 ~ 2837148 (+)
smad3b LOC107755098 coding downstream 298917 2892934 ~ 2915974 (+)
iqch LOC106584827 coding downstream 347076 2941093 ~ 3052608 (+)
G2191724 NA non-coding upstream 3486 2589212 ~ 2589629 (+)
G2191707 NA non-coding upstream 10310 2503457 ~ 2582805 (+)
G2191739 NA non-coding upstream 22171 2570127 ~ 2570944 (+)
G2191671 NA non-coding upstream 184464 2408375 ~ 2408651 (+)
G2191750 NA non-coding downstream 34991 2629008 ~ 2629646 (+)
G2191761 NA non-coding downstream 38679 2632696 ~ 2633085 (+)
G2191765 NA non-coding downstream 45487 2639504 ~ 2640154 (+)
G2191766 NA non-coding downstream 46352 2640369 ~ 2643097 (+)
G2191770 NA non-coding downstream 52156 2646173 ~ 2646390 (+)
G2191616 NA other upstream 345613 2247064 ~ 2247502 (+)
G2191047 NA other upstream 911066 1681554 ~ 1682049 (+)
G2190881 NA other upstream 1340164 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1709018 882940 ~ 884097 (+)
LOC110521136 NA other upstream 1976491 608566 ~ 616624 (+)
G2191994 NA other downstream 166243 2760260 ~ 2762972 (+)
G2192059 NA other downstream 328884 2922901 ~ 2924465 (+)
LOC110521165 fintrim other downstream 1190490 3784498 ~ 3796399 (+)

Expression


Co-expression Network