Gene
RNA
| Item | Value |
|---|---|
| gene id | G2191772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 2650312 ~ 2651480 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_03868 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2507003 | False | 359 | lncRNA | 0.35 | 2 | 2650312 | 2651480 |
| TU2507004 | True | 303 | lncRNA | 0.35 | 3 | 2650878 | 2651480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zwilch | zwilch | coding | upstream | 17028 | 2594442 ~ 2633284 (+) |
| map2k1 | map2k1 | coding | upstream | 62458 | 2535960 ~ 2587854 (+) |
| LOC110521156 | NA | coding | upstream | 120956 | 2524693 ~ 2529356 (+) |
| LOC118945831 | LOC106591986 | coding | upstream | 641873 | 1979235 ~ 2008439 (+) |
| hacd3 | hacd3 | coding | upstream | 809198 | 1789596 ~ 1841114 (+) |
| smad6b | smad6 | coding | downstream | 160413 | 2811893 ~ 2860702 (+) |
| LOC118945783 | NA | coding | downstream | 180533 | 2832013 ~ 2837148 (+) |
| smad3b | LOC107755098 | coding | downstream | 241454 | 2892934 ~ 2915974 (+) |
| iqch | LOC106584827 | coding | downstream | 289613 | 2941093 ~ 3052608 (+) |
| LOC110522690 | skor1 | coding | downstream | 604915 | 3256395 ~ 3270508 (+) |
| G2191770 | NA | non-coding | upstream | 3922 | 2646173 ~ 2646390 (+) |
| G2191766 | NA | non-coding | upstream | 7215 | 2640369 ~ 2643097 (+) |
| G2191765 | NA | non-coding | upstream | 10158 | 2639504 ~ 2640154 (+) |
| G2191761 | NA | non-coding | upstream | 17227 | 2632696 ~ 2633085 (+) |
| G2191750 | NA | non-coding | upstream | 20666 | 2629008 ~ 2629646 (+) |
| G2191773 | NA | non-coding | downstream | 501 | 2651981 ~ 2652228 (+) |
| G2191776 | NA | non-coding | downstream | 20375 | 2671855 ~ 2674594 (+) |
| G2191965 | NA | non-coding | downstream | 64788 | 2716268 ~ 2716518 (+) |
| G2191972 | NA | non-coding | downstream | 68906 | 2720386 ~ 2720643 (+) |
| G2191987 | NA | non-coding | downstream | 92001 | 2743481 ~ 2743801 (+) |
| G2191616 | NA | other | upstream | 402810 | 2247064 ~ 2247502 (+) |
| G2191047 | NA | other | upstream | 968263 | 1681554 ~ 1682049 (+) |
| G2190881 | NA | other | upstream | 1397361 | 1251666 ~ 1252951 (+) |
| G2190529 | NA | other | upstream | 1766215 | 882940 ~ 884097 (+) |
| LOC110521136 | NA | other | upstream | 2033688 | 608566 ~ 616624 (+) |
| G2191994 | NA | other | downstream | 108780 | 2760260 ~ 2762972 (+) |
| G2192059 | NA | other | downstream | 271421 | 2922901 ~ 2924465 (+) |
| LOC110521165 | fintrim | other | downstream | 1133027 | 3784498 ~ 3796399 (+) |
