G2191987


Basic Information

Item Value
gene id G2191987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2743481 ~ 2743801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507282
aggctacctgccacctctacactctaaccactagactacctgccacctctacactctaaccactaggctgcctgccacctctacactctaaccactaggctacctgccacctctacactctaactactaggctacctgccacctctacactctaaccactaggctacctgccacctctacactctaaccactaggctacctgccacctctacactctaaccactaggctacctgccacctctacactctaaccactagactacctgccacctctacactctaactactaggctacctgccacctctacactctaaccacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507282 True 321 lncRNA 0.52 1 2743481 2743801

Neighbor

gene id symbol gene type direction distance location
zwilch zwilch coding upstream 110197 2594442 ~ 2633284 (+)
map2k1 map2k1 coding upstream 155627 2535960 ~ 2587854 (+)
LOC110521156 NA coding upstream 214125 2524693 ~ 2529356 (+)
LOC118945831 LOC106591986 coding upstream 735042 1979235 ~ 2008439 (+)
hacd3 hacd3 coding upstream 902367 1789596 ~ 1841114 (+)
smad6b smad6 coding downstream 68092 2811893 ~ 2860702 (+)
LOC118945783 NA coding downstream 88212 2832013 ~ 2837148 (+)
smad3b LOC107755098 coding downstream 149133 2892934 ~ 2915974 (+)
iqch LOC106584827 coding downstream 197292 2941093 ~ 3052608 (+)
LOC110522690 skor1 coding downstream 512594 3256395 ~ 3270508 (+)
G2191972 NA non-coding upstream 22838 2720386 ~ 2720643 (+)
G2191965 NA non-coding upstream 26963 2716268 ~ 2716518 (+)
G2191776 NA non-coding upstream 68887 2671855 ~ 2674594 (+)
G2191773 NA non-coding upstream 91253 2651981 ~ 2652228 (+)
G2191772 NA non-coding upstream 92001 2650312 ~ 2651480 (+)
G2191993 NA non-coding downstream 15089 2758890 ~ 2759093 (+)
G2191995 NA non-coding downstream 28105 2771906 ~ 2772195 (+)
G2192047 NA non-coding downstream 130765 2874566 ~ 2874872 (+)
G2192049 NA non-coding downstream 133382 2877183 ~ 2877665 (+)
G2192054 NA non-coding downstream 175041 2918842 ~ 2920294 (+)
G2191616 NA other upstream 495979 2247064 ~ 2247502 (+)
G2191047 NA other upstream 1061432 1681554 ~ 1682049 (+)
G2190881 NA other upstream 1490530 1251666 ~ 1252951 (+)
G2190529 NA other upstream 1859384 882940 ~ 884097 (+)
LOC110521136 NA other upstream 2126857 608566 ~ 616624 (+)
G2191994 NA other downstream 16459 2760260 ~ 2762972 (+)
G2192059 NA other downstream 179100 2922901 ~ 2924465 (+)
LOC110521165 fintrim other downstream 1040706 3784498 ~ 3796399 (+)

Expression


Co-expression Network