G2192071


Basic Information

Item Value
gene id G2192071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 2969080 ~ 2969652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507387
gttctatgtgttagGTTCCCTGTGTTTAACACTGTattctgtgttctatgtgttaggttccctgtgtttaaccctgtattctgtgttctatgtgttagGTTCCCCTGTGTTCTAACCCTGTATtatgtgttctatgtgttaggTTCCCCATGTTTAACCCTGTattctgtgttctatgtgttagGTTCCCCATGTTTAACCCTGTattctgtgttctatgtgttagGTTCCCCATGTTTAACCTTGTATTCTTTGTTCTATGTGTTAGGTTCCCATGTGTTCTAACCCTGTattctgtgttctatgtgttagGTTCCCCATGTTTAACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507387 True 330 lncRNA 0.40 2 2969080 2969652

Neighbor

gene id symbol gene type direction distance location
smad3b LOC107755098 coding upstream 53106 2892934 ~ 2915974 (+)
smad6b smad6 coding upstream 108378 2811893 ~ 2860702 (+)
LOC118945783 NA coding upstream 131932 2832013 ~ 2837148 (+)
zwilch zwilch coding upstream 335796 2594442 ~ 2633284 (+)
map2k1 map2k1 coding upstream 381226 2535960 ~ 2587854 (+)
LOC110522690 skor1 coding downstream 286743 3256395 ~ 3270508 (+)
LOC118945764 NA coding downstream 300865 3270517 ~ 3271251 (+)
LOC110521158 LOC106584817 coding downstream 306789 3276441 ~ 3325034 (+)
tle3a LOC104946490 coding downstream 496644 3466296 ~ 3565245 (+)
ddb2 ddb2 coding downstream 718956 3688608 ~ 3726600 (+)
G2192059 NA non-coding upstream 44615 2922901 ~ 2924465 (+)
G2192054 NA non-coding upstream 48786 2918842 ~ 2920294 (+)
G2192049 NA non-coding upstream 91415 2877183 ~ 2877665 (+)
G2192047 NA non-coding upstream 94208 2874566 ~ 2874872 (+)
G2191995 NA non-coding upstream 196885 2771906 ~ 2772195 (+)
G2192111 NA non-coding downstream 99693 3069345 ~ 3071805 (+)
G2192132 NA non-coding downstream 164732 3134384 ~ 3135087 (+)
G2192147 NA non-coding downstream 192843 3162495 ~ 3163081 (+)
G2192154 NA non-coding downstream 199998 3169650 ~ 3170872 (+)
G2192161 NA non-coding downstream 233466 3203118 ~ 3208107 (+)
G2191994 NA other upstream 206108 2760260 ~ 2762972 (+)
G2191616 NA other upstream 721578 2247064 ~ 2247502 (+)
G2191047 NA other upstream 1287031 1681554 ~ 1682049 (+)
iqch LOC106584827 other downstream 70768 2941093 ~ 3052608 (+)
LOC110521165 fintrim other downstream 814855 3784498 ~ 3796399 (+)
G2192425 LOC106584810 other downstream 940452 3910104 ~ 3910366 (+)
LOC110521161 LOC106584807 other downstream 965375 3931206 ~ 3937155 (+)
LOC118945757 LOC106584793 other downstream 1597099 4566366 ~ 4698448 (+)

Expression


Co-expression Network