G2192111


Basic Information

Item Value
gene id G2192111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3069345 ~ 3071805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507430
GGGGACATCACAGTGGAGACTTCACACTAGGGACATCACACTGGAGACATCACACTAGGGACATCACAGTGGAGACATCACACTAGGGACATCACACTGGGGACTTCACACTAGGGACATCACAGTGGAGACATCACACTGGGGACATCACACTGGAGACATCACACTGGGGACATCACACTGGGGACATCACACTGGGGACATCACGCTGGAGACATCACACTAGGGACATCACAGTGGAGACATCACACTAGGGACATCACACTGGGGACATCAC

Function

NR:

description
PREDICTED: leucine-rich repeat transmembrane neuronal protein 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507430 True 277 lncRNA 0.53 3 3069345 3071805

Neighbor

gene id symbol gene type direction distance location
iqch LOC106584827 coding upstream 16737 2941093 ~ 3052608 (+)
smad3b LOC107755098 coding upstream 153371 2892934 ~ 2915974 (+)
smad6b smad6 coding upstream 208643 2811893 ~ 2860702 (+)
LOC118945783 NA coding upstream 232197 2832013 ~ 2837148 (+)
zwilch zwilch coding upstream 436061 2594442 ~ 2633284 (+)
LOC110522690 skor1 coding downstream 184590 3256395 ~ 3270508 (+)
LOC118945764 NA coding downstream 198712 3270517 ~ 3271251 (+)
LOC110521158 LOC106584817 coding downstream 204636 3276441 ~ 3325034 (+)
tle3a LOC104946490 coding downstream 394491 3466296 ~ 3565245 (+)
ddb2 ddb2 coding downstream 616803 3688608 ~ 3726600 (+)
G2192071 NA non-coding upstream 99693 2969080 ~ 2969652 (+)
G2192059 NA non-coding upstream 144880 2922901 ~ 2924465 (+)
G2192054 NA non-coding upstream 149051 2918842 ~ 2920294 (+)
G2192049 NA non-coding upstream 191680 2877183 ~ 2877665 (+)
G2192047 NA non-coding upstream 194473 2874566 ~ 2874872 (+)
G2192132 NA non-coding downstream 62579 3134384 ~ 3135087 (+)
G2192147 NA non-coding downstream 90690 3162495 ~ 3163081 (+)
G2192154 NA non-coding downstream 97845 3169650 ~ 3170872 (+)
G2192161 NA non-coding downstream 131313 3203118 ~ 3208107 (+)
G2192166 NA non-coding downstream 169280 3241085 ~ 3248840 (+)
G2191994 NA other upstream 306373 2760260 ~ 2762972 (+)
G2191616 NA other upstream 821843 2247064 ~ 2247502 (+)
LOC110521165 fintrim other downstream 712702 3784498 ~ 3796399 (+)
G2192425 LOC106584810 other downstream 838299 3910104 ~ 3910366 (+)
LOC110521161 LOC106584807 other downstream 863222 3931206 ~ 3937155 (+)
LOC118945757 LOC106584793 other downstream 1494946 4566366 ~ 4698448 (+)
G2193497 NA other downstream 1705895 4777700 ~ 4779264 (+)

Expression


Co-expression Network