G2192132


Basic Information

Item Value
gene id G2192132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3134384 ~ 3135087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507451
acaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagatgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagatgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagatgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaaataatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaactaatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaaataatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaactaatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaaataatggggatccataataaaccccaggaagagtagctgctgcctcggcaggaaataatggggatccataataaaccaaaaATAGCCTCTGACGGCGTTCAAC

Function

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507451 True 596 lncRNA 0.49 2 3134384 3135087

Neighbor

gene id symbol gene type direction distance location
iqch LOC106584827 coding upstream 81776 2941093 ~ 3052608 (+)
smad3b LOC107755098 coding upstream 218410 2892934 ~ 2915974 (+)
smad6b smad6 coding upstream 273682 2811893 ~ 2860702 (+)
LOC118945783 NA coding upstream 297236 2832013 ~ 2837148 (+)
zwilch zwilch coding upstream 501100 2594442 ~ 2633284 (+)
LOC110522690 skor1 coding downstream 121308 3256395 ~ 3270508 (+)
LOC118945764 NA coding downstream 135430 3270517 ~ 3271251 (+)
LOC110521158 LOC106584817 coding downstream 141354 3276441 ~ 3325034 (+)
tle3a LOC104946490 coding downstream 331209 3466296 ~ 3565245 (+)
ddb2 ddb2 coding downstream 553521 3688608 ~ 3726600 (+)
G2192111 NA non-coding upstream 62579 3069345 ~ 3071805 (+)
G2192071 NA non-coding upstream 164732 2969080 ~ 2969652 (+)
G2192059 NA non-coding upstream 209919 2922901 ~ 2924465 (+)
G2192054 NA non-coding upstream 214090 2918842 ~ 2920294 (+)
G2192049 NA non-coding upstream 256719 2877183 ~ 2877665 (+)
G2192147 NA non-coding downstream 27408 3162495 ~ 3163081 (+)
G2192154 NA non-coding downstream 34563 3169650 ~ 3170872 (+)
G2192161 NA non-coding downstream 68031 3203118 ~ 3208107 (+)
G2192166 NA non-coding downstream 105998 3241085 ~ 3248840 (+)
G2191994 NA other upstream 371412 2760260 ~ 2762972 (+)
G2191616 NA other upstream 886882 2247064 ~ 2247502 (+)
LOC110521165 fintrim other downstream 649420 3784498 ~ 3796399 (+)
G2192425 LOC106584810 other downstream 775017 3910104 ~ 3910366 (+)
LOC110521161 LOC106584807 other downstream 799940 3931206 ~ 3937155 (+)
LOC118945757 LOC106584793 other downstream 1431664 4566366 ~ 4698448 (+)
G2193497 NA other downstream 1642613 4777700 ~ 4779264 (+)

Expression


Co-expression Network