G2192147


Basic Information

Item Value
gene id G2192147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3162495 ~ 3163081 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507467
GTTGTCTATGCATGCATGTCTGCATAGGTTTGTGATTTAAAATCACAAGCGCATATCCTGCAGTTGGGAAACACGCAACTTGGGCagctgtggaatgcagtgttagATTTTTGAAAAACACAATGGGACACATCTCCTCCACAAAGTTGACTTCAGTTTACCAAAAAAGCACCCGGGTGATCATCAatactcttggaagaatgttctatggacagatgagtcaaaaggATCACGTTTGGGAAGACAtatgtctcaatatgtcttccctgttaaagagacatatgtctcaatatgtcttccctgttaaagactcctgggtctcaatatgtcttccctgttaaagagacatatgtctcaatatgtcttccctgttaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaatccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507467 True 519 lncRNA 0.41 2 3162495 3163081

Neighbor

gene id symbol gene type direction distance location
iqch LOC106584827 coding upstream 109887 2941093 ~ 3052608 (+)
smad3b LOC107755098 coding upstream 246521 2892934 ~ 2915974 (+)
smad6b smad6 coding upstream 301793 2811893 ~ 2860702 (+)
LOC118945783 NA coding upstream 325347 2832013 ~ 2837148 (+)
zwilch zwilch coding upstream 529211 2594442 ~ 2633284 (+)
LOC110522690 skor1 coding downstream 93314 3256395 ~ 3270508 (+)
LOC118945764 NA coding downstream 107436 3270517 ~ 3271251 (+)
LOC110521158 LOC106584817 coding downstream 113360 3276441 ~ 3325034 (+)
tle3a LOC104946490 coding downstream 303215 3466296 ~ 3565245 (+)
ddb2 ddb2 coding downstream 525527 3688608 ~ 3726600 (+)
G2192132 NA non-coding upstream 27408 3134384 ~ 3135087 (+)
G2192111 NA non-coding upstream 90690 3069345 ~ 3071805 (+)
G2192071 NA non-coding upstream 192843 2969080 ~ 2969652 (+)
G2192059 NA non-coding upstream 238030 2922901 ~ 2924465 (+)
G2192054 NA non-coding upstream 242201 2918842 ~ 2920294 (+)
G2192154 NA non-coding downstream 6569 3169650 ~ 3170872 (+)
G2192161 NA non-coding downstream 40037 3203118 ~ 3208107 (+)
G2192166 NA non-coding downstream 78004 3241085 ~ 3248840 (+)
G2192203 NA non-coding downstream 145165 3308246 ~ 3308590 (+)
G2191994 NA other upstream 399523 2760260 ~ 2762972 (+)
G2191616 NA other upstream 914993 2247064 ~ 2247502 (+)
LOC110521165 fintrim other downstream 621426 3784498 ~ 3796399 (+)
G2192425 LOC106584810 other downstream 747023 3910104 ~ 3910366 (+)
LOC110521161 LOC106584807 other downstream 771946 3931206 ~ 3937155 (+)
LOC118945757 LOC106584793 other downstream 1403670 4566366 ~ 4698448 (+)
G2193497 NA other downstream 1614619 4777700 ~ 4779264 (+)

Expression


Co-expression Network