Gene
RNA
| Item | Value |
|---|---|
| gene id | G2192154 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 3169650 ~ 3170872 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2507474 | True | 369 | lncRNA | 0.37 | 2 | 3169650 | 3170872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| iqch | LOC106584827 | coding | upstream | 117042 | 2941093 ~ 3052608 (+) |
| smad3b | LOC107755098 | coding | upstream | 253676 | 2892934 ~ 2915974 (+) |
| smad6b | smad6 | coding | upstream | 308948 | 2811893 ~ 2860702 (+) |
| LOC118945783 | NA | coding | upstream | 332502 | 2832013 ~ 2837148 (+) |
| zwilch | zwilch | coding | upstream | 536366 | 2594442 ~ 2633284 (+) |
| LOC110522690 | skor1 | coding | downstream | 85523 | 3256395 ~ 3270508 (+) |
| LOC118945764 | NA | coding | downstream | 99645 | 3270517 ~ 3271251 (+) |
| LOC110521158 | LOC106584817 | coding | downstream | 105569 | 3276441 ~ 3325034 (+) |
| tle3a | LOC104946490 | coding | downstream | 295424 | 3466296 ~ 3565245 (+) |
| ddb2 | ddb2 | coding | downstream | 517736 | 3688608 ~ 3726600 (+) |
| G2192147 | NA | non-coding | upstream | 6569 | 3162495 ~ 3163081 (+) |
| G2192132 | NA | non-coding | upstream | 34563 | 3134384 ~ 3135087 (+) |
| G2192111 | NA | non-coding | upstream | 97845 | 3069345 ~ 3071805 (+) |
| G2192071 | NA | non-coding | upstream | 199998 | 2969080 ~ 2969652 (+) |
| G2192059 | NA | non-coding | upstream | 245185 | 2922901 ~ 2924465 (+) |
| G2192161 | NA | non-coding | downstream | 32246 | 3203118 ~ 3208107 (+) |
| G2192166 | NA | non-coding | downstream | 70213 | 3241085 ~ 3248840 (+) |
| G2192203 | NA | non-coding | downstream | 137374 | 3308246 ~ 3308590 (+) |
| G2192205 | NA | non-coding | downstream | 145710 | 3316582 ~ 3316921 (+) |
| G2191994 | NA | other | upstream | 406678 | 2760260 ~ 2762972 (+) |
| G2191616 | NA | other | upstream | 922148 | 2247064 ~ 2247502 (+) |
| LOC110521165 | fintrim | other | downstream | 613635 | 3784498 ~ 3796399 (+) |
| G2192425 | LOC106584810 | other | downstream | 739232 | 3910104 ~ 3910366 (+) |
| LOC110521161 | LOC106584807 | other | downstream | 764155 | 3931206 ~ 3937155 (+) |
| LOC118945757 | LOC106584793 | other | downstream | 1395879 | 4566366 ~ 4698448 (+) |
| G2193497 | NA | other | downstream | 1606828 | 4777700 ~ 4779264 (+) |
