G2192356


Basic Information

Item Value
gene id G2192356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3746226 ~ 3747574 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507735
cgggggggagaggatgaggacgACATTGGGAAGCTGAAGAAGAAGCTGTCTTCGTCCTCGGGGACCAGAACCAGAACATCCAGGGACACAGAAGGGTCCAAATAAATaatcagggagaaagagagaggtttattgtgtgtttcctttattttggtagttacccGACAATGTCATAGACaagtaactaccaaaataaaggaaacaccaacatacagtgttttaatagggtgttggaccaccaccaaccaaccagaacagattcaatgctccttggtatagattctacaagtgtctggaactctattggagggacgcgacaccattcttccaccagaaattacatcatttggtgttttgttgatggtggtggaaaaacactgtctcaggcggcgctccagaatctcccaagagtgttcaattgggttgactgatacacatcctctatgttcctttgagagccctctttcagtcactgagatctggtgactgagacacatccTCTATGTTCCTTTGAGAGCCCTCTTTCAGTCACTGAGGTCTGGTGACTGATACACATCCTCTATGTTCCTTTGAGAGCCCTCTTTCAGtcactgagatctggtgactgagacacatccTCTATGTTCTTTGGAGAGCCCTCTTTCAGtcactgagatctggtgactgagacacatccTCTATGTTCCTTTGAAAGCCCTCtttcagtcactgagatctcttcttctagccataaTGGGCAACTcggcatattttttttttacctgaccctaagcatgatgggatgttaatttctTAATTACCTCAGGAacaacacctgtgtggaagcacctactTTCAATTTACTGTgtatcatttactcaagtgtttattttatttagtcaTTTTCCTGTCTGCATTTGTAATCTGTTACCTTTGTCTTGTTCAAATCATGTGTTTTATTGAAAATGTTCCATTCCCTTTGTTATAAACAGGAACAATCGTGgctttgactccacacaacacaacatccacagatgtttcaatcgtggctttgactccacacaacatccacagatgtttcaatcgtggctttgactccacacaacacaacatccacagatgtttcaatcgtggctttgactccacacaacacaacatccacagatgtttcaatcgtgactttgactccacacaacacaacatccacagatgtttcaatcgtggctttgactccacacaacacaacatccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507735 True 1231 lncRNA 0.43 2 3746226 3747574

Neighbor

gene id symbol gene type direction distance location
ddb2 ddb2 coding upstream 19626 3688608 ~ 3726600 (+)
tle3a LOC104946490 coding upstream 180981 3466296 ~ 3565245 (+)
LOC110521158 LOC106584817 coding upstream 421192 3276441 ~ 3325034 (+)
LOC118945764 NA coding upstream 474975 3270517 ~ 3271251 (+)
LOC110522690 skor1 coding upstream 475718 3256395 ~ 3270508 (+)
LOC110521165 fintrim coding downstream 36924 3784498 ~ 3796399 (+)
LOC118945791 LOC106584811 coding downstream 65801 3813375 ~ 3818776 (+)
LOC110521164 LOC106584811 coding downstream 80060 3827634 ~ 3831299 (+)
LOC118945778 NA coding downstream 147578 3895152 ~ 3896777 (+)
LOC110521161 LOC106584807 coding downstream 183632 3931206 ~ 3937155 (+)
G2192295 NA non-coding upstream 208774 3537156 ~ 3537452 (+)
G2192294 NA non-coding upstream 210252 3535159 ~ 3535974 (+)
G2192292 NA non-coding upstream 214099 3531658 ~ 3532127 (+)
G2192259 NA non-coding upstream 274272 3470950 ~ 3471954 (+)
G2192258 NA non-coding upstream 276000 3469547 ~ 3470226 (+)
G2192366 NA non-coding downstream 50837 3798411 ~ 3801679 (+)
G2192396 NA non-coding downstream 88074 3835648 ~ 3839595 (+)
G2192404 NA non-coding downstream 110337 3857911 ~ 3858172 (+)
G2192406 NA non-coding downstream 112239 3859813 ~ 3860648 (+)
iqch LOC106584827 other upstream 693774 2941093 ~ 3052608 (+)
G2192059 NA other upstream 821761 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 837044 2892934 ~ 2915974 (+)
G2191994 NA other upstream 983254 2760260 ~ 2762972 (+)
G2191616 NA other upstream 1498724 2247064 ~ 2247502 (+)
G2192425 LOC106584810 other downstream 162530 3910104 ~ 3910366 (+)
LOC118945757 LOC106584793 other downstream 819177 4566366 ~ 4698448 (+)
G2193497 NA other downstream 1030126 4777700 ~ 4779264 (+)

Expression


Co-expression Network