G2192366


Basic Information

Item Value
gene id G2192366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3798411 ~ 3801679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507749
ACTGAGGGTCCCTGAAGGAAAGGGCTTGTTAGTGTAGGAAGGATTTTGATATGGTTAGCATTTATTAGACTTTGTTTGATTATTAGAAGTTTTTTAAATAGTATTACATTTGACAGGAATATAGGACATCTATTATGATTTAGGATTATTGTAAGGATTAAGATAGATTGATTAAGGAAATGTAAGGACTTTAGAGAAAAGCCACTCATAGACATGTTTTTTCCAAAATCAATGATTTTAGATAAAGTCAAACAGTTAGAAGCTTAGTGGTATTTGAGAGATATGAGAGAAATGGGTTACGGTTTAAATTGGTAAATACATATATTTAGGAAAATATATAAGTAGCACAGATAGTTCTTAAAGTAGATAAGAACTTGACAGAGTATTGTTACAGGATTGACATGTATGGACGCccaagggagaattggacatgtggaaAATTAAAAGGGGCTCCTACATGATGATGTTAGACATTAGGATAATttactaatcttacctaagtcattgTTTAAGAGTAGGCAAGAGTGGGCAGAGCCAGGTAACAAAGGGGGGATGGGTAAATTGTGTTCTAGAATAGGATGTGACCTATGGGATAATTAactaataaaaaaattaaaatattaGCTAATAATCAGAACAAATGAGAAACTGCTTGTTAACCaagcctgtatgtccaggattttatgcactacaggtgaactacaggtgaagtcactcaatccagtccctgaggcttgttggggggaccataccaaggactcctggtgacagctagctgaaagagctacccggATTCATATCACACGGCAGGAGGGCAAGACACActgacactgtcgaacaataaacagtgttcgagaggagaactggaattaacagaattctgggggccatctctcgaatgaaAAAACCCTCCCTGTCTTTTCATCCCTGTTGttgttcatagaagtgaagaTGTGTCTGGCTCTTGCTAAGTGATGTGTTCTCGGGGACAGGGTGGGGCTTCACATGGAAGCTGTTCGTCTGAGCTGTTTTATCGTGGGTGACATATTCCTGATACAGCACGTCCTACTTGAGTATGCGGAGAGTGGTAATTTGACTCATGGGTTAGACGATGAGGATTTTGTTCCAAAATAAGCATAAGAGATCCCTAGATCTGGGTAGACAGGAAGTTAGAGTAGAGGTTGGGAAGGATCTCTCAATTGAGTTTTATGTAGACCAAAATGGAGTCTCTAACTACATGGCAGTCTAGGACTCTGAGCCATTATGGCATATATCGGTGCAGGTTCCCATATTGATCGTGGACACAGGTCATAGCTCATTtggagagagagggctatatgAATCCACTCACCCAGTATGGAAGGAGGTGGAGTAGAGTGAAGGTGAGAGTTTTTGATTGTaatcaggagagagggatgtattgCATAAAGATACGCTTAACCCTTTAAACAGAAATGAAGGAGGATCTAGGGTTGTGGTATGATGGATATGACCAGGTCTTGGTCGACACCCTAGTACGGTTCTGGGTAGAGGAGTTTAGGCCAGTATGGTAAAGCTGTTCACGAAAGCAGGAATGCCAGATAATGACAGTTGCATTGACTTGCATGATTTATATCCAACAGGTTCCTCCCTTTACAGTAACCGGAGGAGATTATTACCGTTTGGCCCGGTACAGAACTCTTGGGAAATGATGTCAGGGCGAGGATTTACCGACAGATTGGACATGATTATGCTCCCTTGTACATTTGGGAATGCCTTTCACACTCATTCAATACCGAGACATGAAGTTTAGCCAAATGGGGAAAAAGAGCTACTCCATCCGGGTCTCTTGATGACAAAGTCTACATTGATAACATTGGGGTTCCACGGGGGTGCCAGATGAGTTCAAAGCAAGAAATCAGATCCTAGCAGGATTAGAGTTAAGCACTTCTACTCTCAATAAGAACGTGGACTGAattaattatatttattataatcaacAGCGCTTTAACAATTATACCAGAGATGCTATTAAAGGTTTTGCAGAACAGACTGAAGCAACCAGCTGGATGGCTTGGCAGAATAGAATTGCATTAGATATGTTATTGGCTGAAAAGGGAGAAGTATGCGTGATTATCAGGACCATGTTTGTGCTTACATCCCAAGTAACACAGCTCCGGACGAATCAGTGCCGAAGCCTCAGCTGGTTTGACCACCCTGGTTCACGGTTTGGCAGAAAACTCTGGGGTGGATACTTCTCTGACTAATTGGTTTGATAGTATGTTCGGGAAAATGGAAAAAATATTATGATCACTGTATTATGGGCTGCATTCACCTGTGTGACTGTTTTAGTTTTATGGGGCTGTTGTCTAATTCCCTGTGTACGAGACCTTATTTCCAGGACTCTGGAGAAATCGATGGTGAGGTACCAGTGGATTCCAGGTTCTGACCCGTGGAGTGCTGAATGCATGTCTACAGAACAAGTGGACGAATCTGGATCCTTCATTTGCGGGGAATTTATGTTTGAGGAGACAATGTTTGATGTTTAGGGAGGCTAGGTTGTATCCTGTTTCAATATTAGACTGTTTTTTTATGAAGATTGTAACGAAAATCCTGAGAAGAAGAGTTATGATTCTGATGTAGGCCTGAGAAACAGTCATGGCGAATGCAAGTgttgggttatgtttaggtgatgttttgatgACAAGAAATATCtctaataaaaatagaaataggcttTTTAATATTACAATATAACTACAATGTGTGATTGGATGTATaatatttaatatttaatcaaAGGGTGGATaagttaagggaatttttatctataatgactaattatgtatacatttcaatcaggatgtactaatcagaatactattatgttactgtatatgtactaatcagaatactattatgttgctgaatatgtatgaattttctttcttgatcccagtactgaatagaatgtgtgtgaatgtggtcaagagttagaacaatgactgtctgttccttggtacaaatgaatgaacgatatcttcagactggctagaatgcttatctacacgagAAAACCTTGGCtcgtaaattatattaaattggtagggagacggatgtgggaaggcttgagatacagcctttgtactggaacggagatggcacgggttggtactggaactaatgacgtcatgttcagtttataacctggtaacctgtatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507749 True 3201 lncRNA 0.40 2 3798411 3801679

Neighbor

gene id symbol gene type direction distance location
LOC110521165 fintrim coding upstream 2012 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 71811 3688608 ~ 3726600 (+)
tle3a LOC104946490 coding upstream 233166 3466296 ~ 3565245 (+)
LOC110521158 LOC106584817 coding upstream 473377 3276441 ~ 3325034 (+)
LOC118945764 NA coding upstream 527160 3270517 ~ 3271251 (+)
LOC118945791 LOC106584811 coding downstream 11696 3813375 ~ 3818776 (+)
LOC110521164 LOC106584811 coding downstream 25955 3827634 ~ 3831299 (+)
LOC118945778 NA coding downstream 93473 3895152 ~ 3896777 (+)
LOC110521161 LOC106584807 coding downstream 129527 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 156554 3958233 ~ 4072671 (+)
G2192356 NA non-coding upstream 50837 3746226 ~ 3747574 (+)
G2192295 NA non-coding upstream 260959 3537156 ~ 3537452 (+)
G2192294 NA non-coding upstream 262437 3535159 ~ 3535974 (+)
G2192292 NA non-coding upstream 266284 3531658 ~ 3532127 (+)
G2192396 NA non-coding downstream 33969 3835648 ~ 3839595 (+)
G2192404 NA non-coding downstream 56232 3857911 ~ 3858172 (+)
G2192406 NA non-coding downstream 58134 3859813 ~ 3860648 (+)
G2192407 NA non-coding downstream 59334 3861013 ~ 3862390 (+)
G2192410 NA non-coding downstream 74847 3876526 ~ 3878264 (+)
iqch LOC106584827 other upstream 745959 2941093 ~ 3052608 (+)
G2192059 NA other upstream 873946 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 889229 2892934 ~ 2915974 (+)
G2191994 NA other upstream 1035439 2760260 ~ 2762972 (+)
G2192425 LOC106584810 other downstream 108425 3910104 ~ 3910366 (+)
LOC118945757 LOC106584793 other downstream 765072 4566366 ~ 4698448 (+)
G2193497 NA other downstream 976021 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1191723 4970661 ~ 4994824 (+)

Expression


Co-expression Network