Gene
RNA
| Item | Value |
|---|---|
| gene id | G2192396 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 3835648 ~ 3839595 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: CD151 antigen-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2507790 | False | 364 | lncRNA | 0.39 | 3 | 3835648 | 3839595 |
| TU2507791 | True | 563 | lncRNA | 0.42 | 3 | 3835648 | 3836815 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521164 | LOC106584811 | coding | upstream | 4349 | 3827634 ~ 3831299 (+) |
| LOC118945791 | LOC106584811 | coding | upstream | 16872 | 3813375 ~ 3818776 (+) |
| LOC110521165 | fintrim | coding | upstream | 39249 | 3784498 ~ 3796399 (+) |
| ddb2 | ddb2 | coding | upstream | 109048 | 3688608 ~ 3726600 (+) |
| tle3a | LOC104946490 | coding | upstream | 270403 | 3466296 ~ 3565245 (+) |
| LOC118945778 | NA | coding | downstream | 55557 | 3895152 ~ 3896777 (+) |
| LOC110521161 | LOC106584807 | coding | downstream | 91611 | 3931206 ~ 3937155 (+) |
| LOC110520937 | tmem80 | coding | downstream | 118638 | 3958233 ~ 4072671 (+) |
| LOC110521167 | eps8l2 | coding | downstream | 240444 | 4080039 ~ 4175391 (+) |
| LOC110521168 | fadsd5 | coding | downstream | 373990 | 4213585 ~ 4227030 (+) |
| G2192366 | NA | non-coding | upstream | 33969 | 3798411 ~ 3801679 (+) |
| G2192356 | NA | non-coding | upstream | 88074 | 3746226 ~ 3747574 (+) |
| G2192295 | NA | non-coding | upstream | 298196 | 3537156 ~ 3537452 (+) |
| G2192294 | NA | non-coding | upstream | 299674 | 3535159 ~ 3535974 (+) |
| G2192404 | NA | non-coding | downstream | 18316 | 3857911 ~ 3858172 (+) |
| G2192406 | NA | non-coding | downstream | 20218 | 3859813 ~ 3860648 (+) |
| G2192407 | NA | non-coding | downstream | 21418 | 3861013 ~ 3862390 (+) |
| G2192410 | NA | non-coding | downstream | 36931 | 3876526 ~ 3878264 (+) |
| G2192369 | NA | non-coding | downstream | 43400 | 3882995 ~ 3886325 (+) |
| iqch | LOC106584827 | other | upstream | 783196 | 2941093 ~ 3052608 (+) |
| G2192059 | NA | other | upstream | 911183 | 2922901 ~ 2924465 (+) |
| smad3b | LOC107755098 | other | upstream | 926466 | 2892934 ~ 2915974 (+) |
| G2191994 | NA | other | upstream | 1072676 | 2760260 ~ 2762972 (+) |
| G2192425 | LOC106584810 | other | downstream | 70509 | 3910104 ~ 3910366 (+) |
| LOC118945757 | LOC106584793 | other | downstream | 727156 | 4566366 ~ 4698448 (+) |
| G2193497 | NA | other | downstream | 938105 | 4777700 ~ 4779264 (+) |
| LOC110521176 | LOC106584785 | other | downstream | 1153807 | 4970661 ~ 4994824 (+) |
