G2192422


Basic Information

Item Value
gene id G2192422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3908455 ~ 3908766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507830
AGTATGTTGGTAAGTATGTTGATAGTAAGTATGTTAATGGTAAGTATGTTGGTGTTTACTGCTCCACTTCACCAGCTGTATGACTTGACAGTCATGTGGTGAATGAATGATATGGGGAGAGAATAGAGACCTGCGTAGAGccagttccaaactgtctctctccctcagtgagtCTTGTAGATGAGACACAGAGTGGACTAGGACATCCTCCAGGATAGAGAGcagctctggtctgtctctctggagAGCACACCACAGGGTACCCAGCTCGCACTGACTGGCATGAAGACACACAATACAGCAGGTTacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507830 True 312 lncRNA 0.47 1 3908455 3908766

Neighbor

gene id symbol gene type direction distance location
LOC118945778 NA coding upstream 11678 3895152 ~ 3896777 (+)
LOC110521164 LOC106584811 coding upstream 77156 3827634 ~ 3831299 (+)
LOC118945791 LOC106584811 coding upstream 89679 3813375 ~ 3818776 (+)
LOC110521165 fintrim coding upstream 112056 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 181855 3688608 ~ 3726600 (+)
LOC110521161 LOC106584807 coding downstream 22440 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 49467 3958233 ~ 4072671 (+)
LOC110521167 eps8l2 coding downstream 171273 4080039 ~ 4175391 (+)
LOC110521168 fadsd5 coding downstream 304819 4213585 ~ 4227030 (+)
LOC110521171 NA coding downstream 331284 4175714 ~ 4243996 (+)
G2192369 NA non-coding upstream 22130 3882995 ~ 3886325 (+)
G2192410 NA non-coding upstream 30191 3876526 ~ 3878264 (+)
G2192407 NA non-coding upstream 46065 3861013 ~ 3862390 (+)
G2192406 NA non-coding upstream 47807 3859813 ~ 3860648 (+)
G2192404 NA non-coding upstream 50283 3857911 ~ 3858172 (+)
G2192423 NA non-coding downstream 35 3908801 ~ 3909130 (+)
G2192424 NA non-coding downstream 673 3909439 ~ 3909642 (+)
G2192427 NA non-coding downstream 6818 3915584 ~ 3915808 (+)
G2192428 NA non-coding downstream 7290 3916056 ~ 3916561 (+)
G2192429 NA non-coding downstream 8023 3916789 ~ 3918298 (+)
iqch LOC106584827 other upstream 856003 2941093 ~ 3052608 (+)
G2192059 NA other upstream 983990 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 999273 2892934 ~ 2915974 (+)
G2191994 NA other upstream 1145483 2760260 ~ 2762972 (+)
G2192425 LOC106584810 other downstream 1338 3910104 ~ 3910366 (+)
LOC118945757 LOC106584793 other downstream 657985 4566366 ~ 4698448 (+)
G2193497 NA other downstream 868934 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1084636 4970661 ~ 4994824 (+)

Expression


Co-expression Network