G2192423


Basic Information

Item Value
gene id G2192423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3908801 ~ 3909130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507831
ACAGGAAGCTAGAATCCAAATACTGGTTGCGAATATAAAACGTTGGCCGAACTCTCTCCAAAACGCTTCATCGGGTCTTCCTTGGAACAATGTAGTGTCGTACTCACTCTTTGAAGAGTTTGTCAGCTCCCAGCTCCGTCAGTATCTGAATAAATCGGAGTTCTCCCAGGTCTTcgctttcctccctctctgtctgcctttTCTCTGTGCTCTCCTCCACCCCCATCAACTCCCCTGCTATCACACagtcagacagggacagacagagagagagagacagagacagacagagacacagagacacagagagacagagacagacagagagag

Function

NR:

description
EF-hand calcium-binding domain-containing protein 4A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507831 True 330 lncRNA 0.49 1 3908801 3909130

Neighbor

gene id symbol gene type direction distance location
LOC118945778 NA coding upstream 12024 3895152 ~ 3896777 (+)
LOC110521164 LOC106584811 coding upstream 77502 3827634 ~ 3831299 (+)
LOC118945791 LOC106584811 coding upstream 90025 3813375 ~ 3818776 (+)
LOC110521165 fintrim coding upstream 112402 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 182201 3688608 ~ 3726600 (+)
LOC110521161 LOC106584807 coding downstream 22076 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 49103 3958233 ~ 4072671 (+)
LOC110521167 eps8l2 coding downstream 170909 4080039 ~ 4175391 (+)
LOC110521168 fadsd5 coding downstream 304455 4213585 ~ 4227030 (+)
LOC110521171 NA coding downstream 330920 4175714 ~ 4243996 (+)
G2192422 NA non-coding upstream 35 3908455 ~ 3908766 (+)
G2192369 NA non-coding upstream 22476 3882995 ~ 3886325 (+)
G2192410 NA non-coding upstream 30537 3876526 ~ 3878264 (+)
G2192407 NA non-coding upstream 46411 3861013 ~ 3862390 (+)
G2192406 NA non-coding upstream 48153 3859813 ~ 3860648 (+)
G2192424 NA non-coding downstream 309 3909439 ~ 3909642 (+)
G2192427 NA non-coding downstream 6454 3915584 ~ 3915808 (+)
G2192428 NA non-coding downstream 6926 3916056 ~ 3916561 (+)
G2192429 NA non-coding downstream 7659 3916789 ~ 3918298 (+)
G2192432 NA non-coding downstream 9928 3919058 ~ 3919270 (+)
iqch LOC106584827 other upstream 856349 2941093 ~ 3052608 (+)
G2192059 NA other upstream 984336 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 999619 2892934 ~ 2915974 (+)
G2191994 NA other upstream 1145829 2760260 ~ 2762972 (+)
G2192425 LOC106584810 other downstream 974 3910104 ~ 3910366 (+)
LOC118945757 LOC106584793 other downstream 657621 4566366 ~ 4698448 (+)
G2193497 NA other downstream 868570 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1084272 4970661 ~ 4994824 (+)

Expression


Co-expression Network