G2192425 (LOC106584810)


Basic Information

Item Value
gene id G2192425
gene name LOC106584810
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3910104 ~ 3910366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507833
TCTCTCTTGGTGATGAAGCCTTTTCCTTCTTTATCACAGAGAACAAACAGCTCTTTGGCCTTCCCCATGGTCTCTGGCTGCACCATCCCAGACACCCCTTCCTTGAAGCTAGGTGACCCCCCATGGCCGCGCACCCCTACCCCCCTGCCACCCGGCCTGAGACTGCCACATCCACCTGGCGTTGACAAGATCCGCTGTCTGCGGCTGCATGGGGATGCAGTTCCGCTTCCCTCACCTATCAGCACCTCCCCGTCCTTCAACCA

Function

NR:

description
EF-hand calcium-binding domain-containing protein 4A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507833 True 263 TUCP 0.59 1 3910104 3910366

Neighbor

gene id symbol gene type direction distance location
LOC118945778 NA coding upstream 13327 3895152 ~ 3896777 (+)
LOC110521164 LOC106584811 coding upstream 78805 3827634 ~ 3831299 (+)
LOC118945791 LOC106584811 coding upstream 91328 3813375 ~ 3818776 (+)
LOC110521165 fintrim coding upstream 113705 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 183504 3688608 ~ 3726600 (+)
LOC110521161 LOC106584807 coding downstream 20840 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 47867 3958233 ~ 4072671 (+)
LOC110521167 eps8l2 coding downstream 169673 4080039 ~ 4175391 (+)
LOC110521168 fadsd5 coding downstream 303219 4213585 ~ 4227030 (+)
LOC110521171 NA coding downstream 329684 4175714 ~ 4243996 (+)
G2192424 NA non-coding upstream 462 3909439 ~ 3909642 (+)
G2192423 NA non-coding upstream 974 3908801 ~ 3909130 (+)
G2192422 NA non-coding upstream 1338 3908455 ~ 3908766 (+)
G2192369 NA non-coding upstream 23779 3882995 ~ 3886325 (+)
G2192410 NA non-coding upstream 31840 3876526 ~ 3878264 (+)
G2192427 NA non-coding downstream 5218 3915584 ~ 3915808 (+)
G2192428 NA non-coding downstream 5690 3916056 ~ 3916561 (+)
G2192429 NA non-coding downstream 6423 3916789 ~ 3918298 (+)
G2192432 NA non-coding downstream 8692 3919058 ~ 3919270 (+)
G2192434 NA non-coding downstream 10042 3920408 ~ 3920855 (+)
iqch LOC106584827 other upstream 857652 2941093 ~ 3052608 (+)
G2192059 NA other upstream 985639 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 1000922 2892934 ~ 2915974 (+)
G2191994 NA other upstream 1147132 2760260 ~ 2762972 (+)
LOC118945757 LOC106584793 other downstream 656385 4566366 ~ 4698448 (+)
G2193497 NA other downstream 867334 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1083036 4970661 ~ 4994824 (+)
G2193611 LOC106584794 other downstream 1195692 5106058 ~ 5108156 (+)

Expression


Co-expression Network