G2192429


Basic Information

Item Value
gene id G2192429
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3916789 ~ 3918298 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2507837
tctgtctatgtgtctgtctgtctgtctgtctatgtgtctgtctatgtgtctatgtgtctgtctatgtgtctatgtgtctgtctatgtgtctatgtgtctgtctatgtgtctgtctgtctgtctatgtgtctgtctgtctgtctgtctgtctatgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctatgtgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2507837 True 258 lncRNA 0.45 2 3916789 3918298

Neighbor

gene id symbol gene type direction distance location
LOC118945778 NA coding upstream 20012 3895152 ~ 3896777 (+)
LOC110521164 LOC106584811 coding upstream 85490 3827634 ~ 3831299 (+)
LOC118945791 LOC106584811 coding upstream 98013 3813375 ~ 3818776 (+)
LOC110521165 fintrim coding upstream 120390 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 190189 3688608 ~ 3726600 (+)
LOC110521161 LOC106584807 coding downstream 12908 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 39935 3958233 ~ 4072671 (+)
LOC110521167 eps8l2 coding downstream 161741 4080039 ~ 4175391 (+)
LOC110521168 fadsd5 coding downstream 295287 4213585 ~ 4227030 (+)
LOC110521171 NA coding downstream 321752 4175714 ~ 4243996 (+)
G2192428 NA non-coding upstream 228 3916056 ~ 3916561 (+)
G2192427 NA non-coding upstream 981 3915584 ~ 3915808 (+)
G2192424 NA non-coding upstream 7147 3909439 ~ 3909642 (+)
G2192423 NA non-coding upstream 7659 3908801 ~ 3909130 (+)
G2192422 NA non-coding upstream 8023 3908455 ~ 3908766 (+)
G2192432 NA non-coding downstream 760 3919058 ~ 3919270 (+)
G2192434 NA non-coding downstream 2110 3920408 ~ 3920855 (+)
G2192443 NA non-coding downstream 20708 3939006 ~ 3940611 (+)
G2192444 NA non-coding downstream 23434 3941732 ~ 3949435 (+)
G2192449 NA non-coding downstream 37575 3955873 ~ 3956200 (+)
G2192425 LOC106584810 other upstream 6423 3910104 ~ 3910366 (+)
iqch LOC106584827 other upstream 864337 2941093 ~ 3052608 (+)
G2192059 NA other upstream 992324 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 1007607 2892934 ~ 2915974 (+)
LOC118945757 LOC106584793 other downstream 648453 4566366 ~ 4698448 (+)
G2193497 NA other downstream 859402 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1075104 4970661 ~ 4994824 (+)
G2193611 LOC106584794 other downstream 1187760 5106058 ~ 5108156 (+)

Expression


Co-expression Network