Gene
RNA
| Item | Value |
|---|---|
| gene id | G2192718 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 4588280 ~ 4588734 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2508268 | False | 231 | lncRNA | 0.37 | 2 | 4588280 | 4588734 |
| TU2508269 | True | 231 | lncRNA | 0.37 | 2 | 4588280 | 4588654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945759 | NA | coding | upstream | 17317 | 4570173 ~ 4570963 (+) |
| LOC118945758 | LOC103466506 | coding | upstream | 55653 | 4378293 ~ 4532627 (+) |
| LOC110521166 | LOC106584798 | coding | upstream | 283046 | 4303164 ~ 4305234 (+) |
| LOC110521171 | NA | coding | upstream | 344284 | 4175714 ~ 4243996 (+) |
| LOC110521168 | fadsd5 | coding | upstream | 361250 | 4213585 ~ 4227030 (+) |
| LOC118945760 | NA | coding | downstream | 115368 | 4704102 ~ 4713241 (+) |
| LOC110522695 | LOC106590753 | coding | downstream | 259422 | 4848156 ~ 4869652 (+) |
| LOC110521175 | NA | coding | downstream | 297884 | 4886618 ~ 4950815 (+) |
| LOC110521176 | LOC106584785 | coding | downstream | 381927 | 4970661 ~ 4994824 (+) |
| rab3il1 | LOC106584776 | coding | downstream | 416896 | 5005630 ~ 5033497 (+) |
| G2192695 | NA | non-coding | upstream | 53471 | 4534312 ~ 4534809 (+) |
| G2192690 | NA | non-coding | upstream | 68329 | 4519051 ~ 4519951 (+) |
| G2192639 | NA | non-coding | upstream | 175932 | 4410569 ~ 4412348 (+) |
| G2192619 | NA | non-coding | upstream | 181244 | 4380150 ~ 4407036 (+) |
| G2192625 | NA | non-coding | upstream | 201526 | 4386308 ~ 4386754 (+) |
| G2192713 | NA | non-coding | downstream | 12698 | 4601432 ~ 4606813 (+) |
| G2192743 | NA | non-coding | downstream | 30336 | 4619070 ~ 4619650 (+) |
| G2192744 | NA | non-coding | downstream | 31519 | 4620253 ~ 4620562 (+) |
| G2192756 | NA | non-coding | downstream | 72926 | 4661660 ~ 4662818 (+) |
| G2192766 | NA | non-coding | downstream | 102430 | 4691164 ~ 4696135 (+) |
| LOC118945757 | LOC106584793 | other | upstream | 12256 | 4566366 ~ 4698448 (+) |
| LOC110521161 | LOC106584807 | other | upstream | 651181 | 3931206 ~ 3937155 (+) |
| G2192425 | LOC106584810 | other | upstream | 677914 | 3910104 ~ 3910366 (+) |
| LOC110521165 | fintrim | other | upstream | 802572 | 3784498 ~ 3796399 (+) |
| iqch | LOC106584827 | other | upstream | 1535828 | 2941093 ~ 3052608 (+) |
| G2193497 | NA | other | downstream | 188966 | 4777700 ~ 4779264 (+) |
| G2193611 | LOC106584794 | other | downstream | 517324 | 5106058 ~ 5108156 (+) |
| G2193620 | NA | other | downstream | 534779 | 5123513 ~ 5124709 (+) |
| G2193655 | NA | other | downstream | 609792 | 5198526 ~ 5200369 (+) |
