G2193479


Basic Information

Item Value
gene id G2193479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4749930 ~ 4750412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509250
CTTGTATAGAGCCCTAACTGAGCAGTGTGGGCCCCCAGGTCCTTGTATAGAGCCCTACCTGAGCAGTGTGGCCCCTAGGCCCTTGTATAGAGCCCTACCTGAGCAGTGTGGCCCCCAGGTCCTTGTATAGAGCCCTACCTGAGCAGTGTGGCCCCTAGGCCCTTGTACAGCCCAGCGATGCCCTTCTCTTTCAGTAGTTCCCTGGTCAGCTGCATGGCGGTGGGGGACTTTGTCGGCACGGTCCCTGGTACTATTGTCTCTGGCATCAGCTTCCTCTGGGCCTCTGAGGGTTGGGGGGGCAACATGGTGTTAAATTGTTCTCGCTGTGGGCAATaatatctatctctatctatatatctaacTAACTAGTTTGCTGGTATTTATTTTGGCAAGATTATTATGAGATGATAAGTATTTATAAGGCTTGATAATAGCAGGTCAACGGGCCTATGTGATTCCATTACTGACCACACGAGGGCAGCA

Function

NR:

description
mitochondrial glutamate carrier 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509250 True 483 lncRNA 0.51 1 4749930 4750412

Neighbor

gene id symbol gene type direction distance location
LOC118945760 NA coding upstream 40541 4704102 ~ 4713241 (+)
LOC118945757 LOC106584793 coding upstream 51482 4566366 ~ 4698448 (+)
LOC118945759 NA coding upstream 178967 4570173 ~ 4570963 (+)
LOC118945758 LOC103466506 coding upstream 217303 4378293 ~ 4532627 (+)
LOC110521166 LOC106584798 coding upstream 444696 4303164 ~ 4305234 (+)
LOC110522695 LOC106590753 coding downstream 97744 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 136206 4886618 ~ 4950815 (+)
LOC110521176 LOC106584785 coding downstream 220249 4970661 ~ 4994824 (+)
rab3il1 LOC106584776 coding downstream 255218 5005630 ~ 5033497 (+)
LOC110522698 LOC106593352 coding downstream 461954 5212366 ~ 5246288 (+)
G2193477 NA non-coding upstream 3129 4746302 ~ 4746801 (+)
G2193475 NA non-coding upstream 6947 4742678 ~ 4742983 (+)
G2193472 NA non-coding upstream 15474 4732983 ~ 4734456 (+)
G2193471 NA non-coding upstream 17070 4732171 ~ 4732860 (+)
G2193462 NA non-coding upstream 27814 4721906 ~ 4722116 (+)
G2193480 NA non-coding downstream 595 4751007 ~ 4751244 (+)
G2193484 NA non-coding downstream 7198 4757610 ~ 4758024 (+)
G2193490 NA non-coding downstream 13944 4764356 ~ 4764677 (+)
G2193491 NA non-coding downstream 15103 4765515 ~ 4765876 (+)
G2193498 NA non-coding downstream 29184 4779596 ~ 4779880 (+)
LOC110521161 LOC106584807 other upstream 812831 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 839564 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 964222 3784498 ~ 3796399 (+)
iqch LOC106584827 other upstream 1697478 2941093 ~ 3052608 (+)
G2193497 NA other downstream 27288 4777700 ~ 4779264 (+)
G2193611 LOC106584794 other downstream 355646 5106058 ~ 5108156 (+)
G2193620 NA other downstream 373101 5123513 ~ 5124709 (+)
G2193655 NA other downstream 448114 5198526 ~ 5200369 (+)

Expression


Co-expression Network