G2193480


Basic Information

Item Value
gene id G2193480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4751007 ~ 4751244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509251
GTGCTAATTTGCATGTtcaaatctgagagtaaatagagccgaatatattgataaaagttacCTTGtcagagagatttacacggttatcaaaccTTCacagaaacacagcccttatattaagtgtttctaaaatcccttaTGGGGAAAAAATTAATGGAGGAAAACTCGagaccaccttcactccacacacagagacacgtataCAAAGCTCTCCGTTTGGCATatttgaccataattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509251 True 238 lncRNA 0.37 1 4751007 4751244

Neighbor

gene id symbol gene type direction distance location
LOC118945760 NA coding upstream 41618 4704102 ~ 4713241 (+)
LOC118945757 LOC106584793 coding upstream 52559 4566366 ~ 4698448 (+)
LOC118945759 NA coding upstream 180044 4570173 ~ 4570963 (+)
LOC118945758 LOC103466506 coding upstream 218380 4378293 ~ 4532627 (+)
LOC110521166 LOC106584798 coding upstream 445773 4303164 ~ 4305234 (+)
LOC110522695 LOC106590753 coding downstream 96912 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 135374 4886618 ~ 4950815 (+)
LOC110521176 LOC106584785 coding downstream 219417 4970661 ~ 4994824 (+)
rab3il1 LOC106584776 coding downstream 254386 5005630 ~ 5033497 (+)
LOC110522698 LOC106593352 coding downstream 461122 5212366 ~ 5246288 (+)
G2193479 NA non-coding upstream 595 4749930 ~ 4750412 (+)
G2193477 NA non-coding upstream 4206 4746302 ~ 4746801 (+)
G2193475 NA non-coding upstream 8024 4742678 ~ 4742983 (+)
G2193472 NA non-coding upstream 16551 4732983 ~ 4734456 (+)
G2193471 NA non-coding upstream 18147 4732171 ~ 4732860 (+)
G2193484 NA non-coding downstream 6366 4757610 ~ 4758024 (+)
G2193490 NA non-coding downstream 13112 4764356 ~ 4764677 (+)
G2193491 NA non-coding downstream 14271 4765515 ~ 4765876 (+)
G2193498 NA non-coding downstream 28352 4779596 ~ 4779880 (+)
G2193499 NA non-coding downstream 34819 4786063 ~ 4786312 (+)
LOC110521161 LOC106584807 other upstream 813908 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 840641 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 965299 3784498 ~ 3796399 (+)
iqch LOC106584827 other upstream 1698555 2941093 ~ 3052608 (+)
G2193497 NA other downstream 26456 4777700 ~ 4779264 (+)
G2193611 LOC106584794 other downstream 354814 5106058 ~ 5108156 (+)
G2193620 NA other downstream 372269 5123513 ~ 5124709 (+)
G2193655 NA other downstream 447282 5198526 ~ 5200369 (+)

Expression


Co-expression Network